KEGG   Streptomyces sp. 4F: ASR50_25200
Entry
ASR50_25200       CDS       T04265                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
strf  Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:strf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:strf03032]
    ASR50_25200
   03036 Chromosome and associated proteins [BR:strf03036]
    ASR50_25200
   03400 DNA repair and recombination proteins [BR:strf03400]
    ASR50_25200
DNA replication proteins [BR:strf03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ASR50_25200
Chromosome and associated proteins [BR:strf03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    ASR50_25200
DNA repair and recombination proteins [BR:strf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      ASR50_25200
SSDB
Motif
Pfam: Bac_DNA_binding HC2 Extensin_1
Other DBs
NCBI-ProteinID: ALV52381
LinkDB
Position
5601951..5602589
AA seq 212 aa
MNKAQLVEAIADKVGGRQQAADAVDHVLDAIVRAVVSGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLTGGASATVKK
AAAKKTTAKKAATAKKAAAKKTTAKKATAKTTASKTTAKKAPAKSTAAAKSTAAKKTTAK
KAPAKKATAKKAPAKKSTARKTTAKKTTARKK
NT seq 639 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtgggcggccgccagcaggcc
gccgacgccgtcgaccacgtactggacgccatcgtccgcgcggtcgtctcgggggagcgg
gtctcggtcaccggcttcggttcgttcgagaaggtcgaccgccccgcccgttacgcccgc
aacccccagacgggcgagcgggttcgggtcaagaagacctccgtcccgcgtttccgcgcc
ggacagggcttcaaggacctggtcagcggctcgaagaagctgccgcgcggcggcgaggtc
gccgtgaagaaggctcccaagggcagcctcaccggcggcgcttcggcgacggtgaagaag
gccgcggccaagaagaccacggcgaagaaggccgccaccgccaagaaggcggccgcgaag
aagacgacggccaagaaggccaccgccaagaccacggcgagcaagaccacggcgaagaag
gcccccgccaagtcgactgccgcggccaagagcaccgccgcgaagaagaccacggcgaag
aaggccccggcgaagaaggcgacggccaagaaggcccccgccaagaagtcgaccgcgcgc
aagaccaccgccaagaagaccaccgcccgcaagaagtag

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