Streptomyces sp. 4F: ASR50_25200
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Entry
ASR50_25200 CDS
T04265
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
strf
Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strf03032
]
ASR50_25200
03036 Chromosome and associated proteins [BR:
strf03036
]
ASR50_25200
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_25200
DNA replication proteins [BR:
strf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ASR50_25200
Chromosome and associated proteins [BR:
strf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ASR50_25200
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ASR50_25200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
ALV52381
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All DBs
Position
5601951..5602589
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AA seq
212 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDHVLDAIVRAVVSGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLTGGASATVKK
AAAKKTTAKKAATAKKAAAKKTTAKKATAKTTASKTTAKKAPAKSTAAAKSTAAKKTTAK
KAPAKKATAKKAPAKKSTARKTTAKKTTARKK
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtgggcggccgccagcaggcc
gccgacgccgtcgaccacgtactggacgccatcgtccgcgcggtcgtctcgggggagcgg
gtctcggtcaccggcttcggttcgttcgagaaggtcgaccgccccgcccgttacgcccgc
aacccccagacgggcgagcgggttcgggtcaagaagacctccgtcccgcgtttccgcgcc
ggacagggcttcaaggacctggtcagcggctcgaagaagctgccgcgcggcggcgaggtc
gccgtgaagaaggctcccaagggcagcctcaccggcggcgcttcggcgacggtgaagaag
gccgcggccaagaagaccacggcgaagaaggccgccaccgccaagaaggcggccgcgaag
aagacgacggccaagaaggccaccgccaagaccacggcgagcaagaccacggcgaagaag
gcccccgccaagtcgactgccgcggccaagagcaccgccgcgaagaagaccacggcgaag
aaggccccggcgaagaaggcgacggccaagaaggcccccgccaagaagtcgaccgcgcgc
aagaccaccgccaagaagaccaccgcccgcaagaagtag
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