KEGG   Streptomyces sp. 4F: ASR50_25455
Entry
ASR50_25455       CDS       T04265                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
strf  Streptomyces sp. 4F
Pathway
strf02020  Two-component system
strf02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:strf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ASR50_25455
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ASR50_25455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:strf03021]
    ASR50_25455
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:strf02035]
    ASR50_25455
Transcription machinery [BR:strf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ASR50_25455
Bacterial motility proteins [BR:strf02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    ASR50_25455
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 Sigma70_ECF HTH_31 HTH_23 UPF0122
Other DBs
NCBI-ProteinID: ALV52430
LinkDB
Position
5653387..5654229
AA seq 280 aa
MPQHTSGSDRAAIPPAARDGGSVRPPAPSTLDELWRSYKATGDERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSFGVFGLIDAIEKFDVDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPTENEVAAEMGITVGELHAVFSQLSLANVVAL
EELLHVGGDGGDQLSFMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq 843 nt   +upstreamnt  +downstreamnt
atgccccagcacacctccgggtccgaccgggcggcgatccccccagccgcccgcgacggt
ggcagcgtgcggccgcccgctccctcgacgctcgacgagctgtggcggtcgtacaaggcg
acgggggacgaacgtctgcgggagcagctgatcctgcactactcaccgctggtgaagtac
gtcgccggccgggtcagcgtgggcctgccgcccaacgtcgaacaggcggacttcgtctcc
ttcggcgtcttcggtctgatcgacgcgatcgagaagttcgacgtcgaccgtgagatcaag
ttcgagacgtacgcgatcacccggatccgcggcgcgatgatcgacgagctgcgggcactg
gactggatcccccgctccgtgcggcagaaggcgcgcaacgtggagcgcgcctacgccacc
ctcgaggcgcggctgcggcgcaccccgacggagaacgaggtcgccgccgagatgggcatc
accgtcggcgagctgcacgcggtgttcagccagctctccctcgccaacgtcgtcgccctg
gaggagctgctgcacgtcggcggtgacggcggcgaccagctcagcttcatggacaccctg
gaggacaccgccgccgacaacccggtggaggtcgccgaggaccgggagctgcgccgcttc
ctggcgcgggccatcaacaccctgcccgagcgggagaagaccgtggtcacgctgtactac
tacgagggcctcaccctggccgagatcggcaacgtgctcggtgtcaccgagagccgcgtg
agtcagatccacaccaagtcggtgctccagctgcgcgccaagctggccagtttcgggcgc
tga

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