Streptomyces sp. 4F: ASR50_25455
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Entry
ASR50_25455 CDS
T04265
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K02405
RNA polymerase sigma factor FliA
Organism
strf
Streptomyces sp. 4F
Pathway
strf02020
Two-component system
strf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ASR50_25455
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ASR50_25455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strf03021
]
ASR50_25455
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
strf02035
]
ASR50_25455
Transcription machinery [BR:
strf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ASR50_25455
Bacterial motility proteins [BR:
strf02035
]
Flagellar system
Flagellar assembly proteins
Stator
ASR50_25455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ALV52430
LinkDB
All DBs
Position
5653387..5654229
Genome browser
AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAARDGGSVRPPAPSTLDELWRSYKATGDERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSFGVFGLIDAIEKFDVDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPTENEVAAEMGITVGELHAVFSQLSLANVVAL
EELLHVGGDGGDQLSFMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgatccccccagccgcccgcgacggt
ggcagcgtgcggccgcccgctccctcgacgctcgacgagctgtggcggtcgtacaaggcg
acgggggacgaacgtctgcgggagcagctgatcctgcactactcaccgctggtgaagtac
gtcgccggccgggtcagcgtgggcctgccgcccaacgtcgaacaggcggacttcgtctcc
ttcggcgtcttcggtctgatcgacgcgatcgagaagttcgacgtcgaccgtgagatcaag
ttcgagacgtacgcgatcacccggatccgcggcgcgatgatcgacgagctgcgggcactg
gactggatcccccgctccgtgcggcagaaggcgcgcaacgtggagcgcgcctacgccacc
ctcgaggcgcggctgcggcgcaccccgacggagaacgaggtcgccgccgagatgggcatc
accgtcggcgagctgcacgcggtgttcagccagctctccctcgccaacgtcgtcgccctg
gaggagctgctgcacgtcggcggtgacggcggcgaccagctcagcttcatggacaccctg
gaggacaccgccgccgacaacccggtggaggtcgccgaggaccgggagctgcgccgcttc
ctggcgcgggccatcaacaccctgcccgagcgggagaagaccgtggtcacgctgtactac
tacgagggcctcaccctggccgagatcggcaacgtgctcggtgtcaccgagagccgcgtg
agtcagatccacaccaagtcggtgctccagctgcgcgccaagctggccagtttcgggcgc
tga
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