Streptomyces sp. 4F: ASR50_26375
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Entry
ASR50_26375 CDS
T04265
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
strf
Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strf03032
]
ASR50_26375
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_26375
Enzymes [BR:
strf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ASR50_26375
DNA replication proteins [BR:
strf03032
]
Prokaryotic type
DNA Topoisomerases
ASR50_26375
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ASR50_26375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
HALZ
Motif
Other DBs
NCBI-ProteinID:
ALV52594
LinkDB
All DBs
Position
complement(5885497..5887950)
Genome browser
AA seq
817 aa
AA seq
DB search
MARRSTKTPPPDDPYEEKILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRIV
YQMNEMGLRPERGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRLPLVDGHGNF
GSLGNDDPPAAMRYTECRMAEATSLMTESIDEDTVDFAPNYDGQEQEPVALPAAFPNLLV
NGASGIAVGMATNMPPHNLREVVAAARHLIRYPNADLDALMKHVPGPDLPTGGRIVGLNG
IRDAYETGRGTFKIRATVTVEDVTARRKGLVVTELPFTVGPEKVIAKIKDLVGSKKLQGI
ADVKDLTDREHGLRLVIEVKNGFVPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLK
ELLEVYLDHRFTVVRRRSEFRRGKKRDRLHLVEGLLTALLDIDEVIRLIRSSENSAQAKQ
RLIEHFSLSDVQTQYILDTPLRRLTKYDRIELEAEKDRLNAEIEELTRILESDAELRKLV
SSELASVAKKFGNDRRTTLLESAGAPATVPLQVADTPCRVLLSSTGLLARTADDRPLADA
SGGKRVKHDVIVSAVPATARGEIGVVTSAGRLLRVNVIDLPQLPESMPVPNLSGGAPLAE
FVSLEDEEQVVCLTTLDESSPGLAIGTQQGVVKRVVPDYPSNKEELEVITLKEGDRIVGA
AELRTGEEDLVFITDDAQLLRFPASIVRPQGRPAGGMTGIKLGEGAKVISFTAVDPAADA
VVFTVAGSRGTLDDSVQTTAKATPFDQYPRKGRATGGVRCQRFLKGEDCLSLAWAGPVPA
RAAQKNGTAVDLPEIDPRRDGSGVSLGKTVAVVAGPV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagaccccgccgcccgacgacccgtacgaggagaagatcctc
gacatcgacgtcgtcgacgagatgcagggctccttcctcgagtacgcgtactcggtcatc
tactcccgcgccctgcccgacgcgcgtgacggtctcaagccggtgcaccgccgcatcgtc
taccagatgaacgagatgggcctgcgccccgagcgcggttacgtcaagtgcgcgcgcgtg
gtgggcgaggtgatgggaaagctgcacccgcacggcgacgcgtcgatctacgacgccctc
gtccgcatggcgcagccgttctccatgcgcctgcccctggtggacggccacggcaacttc
ggctcgctgggcaacgacgacccgccggccgccatgcggtacaccgagtgccgcatggcc
gaggccacgagcctgatgaccgagtccatcgacgaggacacggtcgacttcgcgcccaac
tacgacggtcaggagcaggaaccggtcgccctgcccgccgcgttccccaacctcctggtg
aacggcgcctcgggcatcgccgtcggcatggcgaccaacatgccgccgcacaacctgcgt
gaggtcgtcgccgccgcacgccacctgatccggtacccgaacgccgacctcgacgccctg
atgaagcacgtcccgggccccgacctgcccacgggcggccggatcgtcggcctcaacggc
atccgggacgcgtacgagaccggccgcggcacgttcaagatccgcgcgacggtgaccgtg
gaggacgtgacggcgcgccgcaagggcctggtcgtcaccgagctgccgttcacggtgggc
cccgagaaggtgatcgccaagatcaaggacctggtgggctccaagaagctccagggcatc
gccgacgtcaaggacctcaccgaccgcgagcacggcctgcgcctggtcatcgaggtcaag
aacggcttcgtgccggaggccgtgctggagcagctctacaagctgacgccgatggaggag
tccttcggcatcaacaacgtggcgctggtggacggccagcccctcaccctcggcctcaag
gagctgctcgaggtctacctcgaccaccgcttcaccgtggtgcgccgccgctcggagttc
cgccgcggcaagaagcgcgaccggctgcacctggtcgagggtctgctcacggccctgctc
gacatcgacgaggtcatccgcctgatccgctccagcgagaactcggcgcaggccaagcag
cggctcatcgagcacttctcgctgagcgacgtccagacgcagtacatcctggacaccccg
ctgcgccgcctcaccaagtacgaccggatcgagctggaggccgagaaggaccggctgaac
gcggagatcgaggagctgacccggatcctggagtcggacgcggagctgcgcaagctcgtc
tcgtccgaactggcttcggtggcgaagaagttcggcaacgaccggcgcacgacgctgctg
gagtcggccggcgccccggccacggtgccgcttcaggtggcggacaccccgtgccgcgtg
ctcctgtcgtcgacgggtctgctggcgcgcaccgccgacgaccggccgctcgccgacgcc
tccggcggcaagcgcgtcaagcacgacgtgatcgtctcggcggtcccggcgaccgcgcgc
ggcgagatcggcgtggtcacgtcggcgggccggctgctccgggtcaacgtgatcgacctg
ccccagctgcccgagtcgatgccggtgccgaacctgtcgggcggcgcgccgctggcggag
ttcgtgtccctggaggacgaggaacaggtggtgtgtctgaccacgctcgacgagtcctcg
ccgggcctggcgatcggcacccagcagggcgtggtcaagcgcgtggtgcccgactacccc
tccaacaaggaggagctggaggtcatcaccctcaaggagggcgaccggatcgtcggcgcg
gccgaactgcgcacgggcgaggaggacctcgtcttcatcaccgacgacgcgcagctgctg
cgcttcccggcctccatcgtgcgtcctcagggtcgtccggcgggcggcatgacgggcatc
aagctcggcgagggcgcgaaggtcatcagcttcacggcggtcgacccggcggcggacgcg
gtggtgttcaccgtcgcgggctcgcgcggcacgctggacgactccgtccagacgacggcc
aaggcgaccccgttcgaccagtacccgcgcaagggccgggccaccggcggcgtgcgctgc
cagcggttcctgaagggcgaggactgcctgtccttggcctgggcgggccccgtcccggcg
cgcgcggcgcagaagaacggcacggcggtggacctcccggagatcgacccgcgccgcgac
gggtcgggcgtgtccctgggcaagacggtcgccgtggtggcggggccggtctag
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