Streptomyces sp. 4F: ASR50_26815
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Entry
ASR50_26815 CDS
T04265
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
strf
Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_26815
Enzymes [BR:
strf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ASR50_26815
DNA repair and recombination proteins [BR:
strf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ASR50_26815
Prokaryotic type
ASR50_26815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF3710
Motif
Other DBs
NCBI-ProteinID:
ALV52674
LinkDB
All DBs
Position
complement(6032321..6033697)
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AA seq
458 aa
AA seq
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MTVAVVLFTADLRLRDHPPLHAALRSADEVVPLFVQDSGIHAAGFDAPNRRAFLADCLHD
LDASLRQRGGRLVVRSGPVVPEVCAVAAACGAAEVHMAAGVTAYAHRREERLREELGAVG
VALRVHDAVITALAPGAVTPSGSGHYGVFTPYLRRWSQQTLRTPLAAPRAVRVPDGVRGE
PLPGRADVSGTSPGLPPGGETAGRDRLARWSRSGGMAAYEDRHDDLAGDATSRLSPYLHF
ETLSAAEAVHRAREQGGPGAEAFVRQLCWRDFHHQVLAARPEASWRDYRARDDHWRGEDD
AAEDIAAWRDGRTGYPIVDAAMRQLRHEGWMHNRARLLSASFLTKTLYVDWRIGARHFLD
LLVDGDVVNNQLNWQWAAGTGTDTRPHRVLNPTVQARRFDPDGAYVRRWVPELADVDGRR
IHEPWRLPPDLRDALGYPDPVVDLAEGLTRFRRARGRD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgccgtggtcctcttcaccgccgacctgcgtctgcgcgaccaccccccgctg
cacgcggcgctcaggtccgcggacgaggtggtgccgctgttcgtccaggacagcggcatt
cacgcggccggcttcgacgcgccgaaccggcgggccttcctcgcggactgcctgcacgac
ctcgacgcctcgctgcggcagcgcggcgggcggctcgtggtccgctcggggccggtcgtg
ccggaggtgtgcgcggtggccgccgcgtgcggggccgccgaggtgcacatggcggcgggc
gtgacggcgtacgcccaccgccgtgaggagcggctgcgcgaggagctcggcgccgtcggc
gtggcgctgcgcgtgcacgacgcggtgatcaccgcgctcgccccgggggcggtgaccccg
tccggctcgggccactacggcgtgttcaccccgtacctgcgccgctggtcgcagcagacc
ctgcgcacgccgctcgcggcgccccgcgccgtccgcgtccccgacggggtgcggggtgag
ccgctgcccggccgcgcggacgtgtccggcacctcccccggtctcccgcccggaggggag
acggccggccgggaccggctggcgcggtggtcgcgctccgggggcatggccgcctacgag
gaccggcacgacgacctcgcgggcgacgccacgtcgcggctgtcgccgtacctccacttc
gagacgctctccgcggcggaggccgtccaccgggcacgcgagcagggcggtcctggcgcg
gaggcgttcgtgcgtcagctctgctggcgggacttccaccaccaggtgctggcggcgcgc
cccgaggcgtcctggcgggactaccgcgcccgcgacgaccactggcgcggcgaggacgac
gccgccgaggacatcgccgcgtggcgggacggccgcaccggctacccgatcgtcgacgcg
gccatgcggcagctgcggcacgagggctggatgcacaaccgggcccgcctgctttcggcg
agcttcctgacgaagacgctgtacgtcgactggcggatcggcgcccggcacttcctggac
ctgctggtggacggcgacgtcgtcaacaaccagctcaactggcagtgggccgccggcacg
ggcaccgacacccgcccgcaccgcgtcctcaaccccacggtccaggccaggcgcttcgac
ccggacggcgcgtacgtacgccgctgggtcccggaactcgcggacgtcgacggcaggcgg
atccacgaaccgtggcgcctcccgccggacctgcgcgacgccctcggctaccccgacccg
gtggtggacctcgccgaagggctcacccgtttccgtcgcgcgcggggccgcgactga
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