Streptomyces sp. 4F: ASR50_27785
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Entry
ASR50_27785 CDS
T04265
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf03030
DNA replication
strf03430
Mismatch repair
strf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASR50_27785
03430 Mismatch repair
ASR50_27785
03440 Homologous recombination
ASR50_27785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strf03032
]
ASR50_27785
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_27785
Enzymes [BR:
strf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASR50_27785
DNA replication proteins [BR:
strf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASR50_27785
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASR50_27785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALV52847
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All DBs
Position
6282782..6283504
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AA seq
240 aa
AA seq
DB search
MGWHRELLIGFDLETTGTDPREARIVTGAVIELRAGETLGRREWLADPGVPIPADAVAVH
GISGERAAAEGRPADQVADAIAGVLAAYWKTGVPVVAYNASFDLSLLSAELRRYGLPSLS
DRLGGAAPGPVIDPYTIDRAVDRYRRGKRTLEAVCAEYGVRLDAAHDATADALAAARLAC
AIADRHPKVAALGPAELHRRQIEWYAAWAADFQDFLRRKGDPAALVDGTWPLRAPAEEPV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcaccgggagctgctgatcggcttcgatctggagacgacggggacggatccg
cgcgaggcgcggatcgtcacgggagccgtgatcgagctccgagcgggggagacgctgggg
cgccgggagtggctggccgatccgggcgtgccgatccccgccgacgcggtcgcggtccac
ggcatcagcggcgagcgcgcggccgccgagggccgccccgccgaccaggtggccgacgcc
atcgccggcgtcctcgccgcctactggaagaccggcgtcccggtcgtcgcctacaacgcc
tcgttcgacctgagcctgctctccgccgagctgcggcggtacggactgccctcgctgagc
gaccgcctgggcggcgccgccccgggcccggtgatcgacccgtacaccatcgaccgggcc
gtcgaccgctaccgccgcggcaagcgcaccctcgaggcggtctgcgcggagtacggcgtc
cgcctcgacgcggcgcacgacgcgacggccgacgccctcgccgccgcccgcctggcctgc
gcgatagccgaccgccacccgaaggtggcggccctcggcccggcggagctgcaccgccgt
cagatcgagtggtacgcggcctgggcggcggacttccaggacttcctgcgccgcaagggc
gacccggccgccctcgtcgacggcacctggccgctgcgcgcgccggcggaggagccggtc
tga
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