Streptomyces sp. 4F: ASR50_29385
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Entry
ASR50_29385 CDS
T04265
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf00061
Fatty acid biosynthesis
strf00071
Fatty acid degradation
strf01100
Metabolic pathways
strf01212
Fatty acid metabolism
strf02024
Quorum sensing
strf04146
Peroxisome
Module
strf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ASR50_29385
00071 Fatty acid degradation
ASR50_29385
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ASR50_29385
09145 Cellular community - prokaryotes
02024 Quorum sensing
ASR50_29385
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
strf01004
]
ASR50_29385
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
strf04147
]
ASR50_29385
Enzymes [BR:
strf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ASR50_29385
Lipid biosynthesis proteins [BR:
strf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ASR50_29385
Exosome [BR:
strf04147
]
Exosomal proteins
Exosomal proteins of breast milk
ASR50_29385
Exosomal proteins of breast cancer cells
ASR50_29385
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ALV53122
LinkDB
All DBs
Position
complement(6638950..6640776)
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AA seq
608 aa
AA seq
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MREFTNPPLSQAPTVGGLADVVFQYAEEEPLRAALGRKDDDGHWRDVTSAEFRDEVLALA
KGLLASGIRFGDRVAIMSRTRYEWTLFDFALWSVGAQVVPVYPTSSAEQCSWMLHDAEVS
AAIVEHEDHAMTIATVIDRLPRMRRLWQLDAGAVQELYDAGAHLEDDVVHRHRRAVTPES
VATIIYTSGTTGRPKGCVLTHGNFMYEADTVIERWEPVFHSKRGDEASTLLFLPLAHVFG
RMVEVAAIRGKVKFGHQPQLNAAALMPDLAAFRPTFILAVPYIFEKVFNAARRKAEREGR
AGPFEKAVDVAVRYADAMEARAWGTGPGPSAGLRMQHQLFDKLVYSKIRTAMGGRIRHAM
SGGSAMDRRLGLFFAGAGVHIYEGYGLTESTAAATANPPERTRYGTVGQPIPGVSVHIAD
DGEIWLHGENVFQGYLNNPKATDETLHDGWLATGDLGSVDEDGYLTITGRKKEILVTSGG
KSVSPGGLEERVRDHPLVNQCIVVGNDRPYVAALVTLDQEAVEHWLAMRGKPQLSPAELV
RDPDLETEVRRAVVAANTLVSQAESIRTFRILAQPFTEEHGLLTPSLKLKRKAIEKAYTD
EVEALYRA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagttcaccaaccctccgttgtcacaggcgcccacggtgggcggtctggccgac
gtggtgttccagtacgccgaggaggagccgctgcgggccgcgctcggccgcaaggacgac
gacggccactggcgcgacgtgacctccgccgagttccgtgacgaggtgctcgccctggcg
aagggcctgctggcgagcgggatccggttcggcgaccgcgtcgcgatcatgtcccgcacc
cggtacgagtggacgctcttcgacttcgcgctgtggtcggtcggcgcccaggtcgtcccc
gtctacccgacctcgtcggccgagcagtgctcgtggatgctgcacgacgctgaggtgtcg
gcggcgatcgtggagcacgaggaccacgcgatgaccatcgcgacggtcatcgaccgcctg
ccgcggatgcgccggctgtggcagctggacgcgggcgcggtgcaggagctgtacgacgcg
ggcgcccacctcgaggacgacgtggtgcaccggcaccgcagggcggtcacccccgagtcg
gtggcgacgatcatctacacctcgggcaccaccggccgccccaagggctgcgtcctgacg
cacggcaacttcatgtacgaggcggacaccgtcatcgagcgctgggagccggtgttccac
tccaagcggggcgacgaggcgtcgacactgctgttcctgccgctggcgcacgtcttcggg
cggatggtggaggtcgcggcgatccgcggcaaggtgaagttcggccaccagccgcagctc
aacgcggccgcgctgatgcccgatctggccgctttccggccgacgttcatcctggccgtg
ccgtacatcttcgagaaggtgttcaacgcggcgcggcgcaaggccgagcgggaggggcgc
gcgggcccgttcgagaaggcggtcgacgtggccgtgcggtacgccgacgcgatggaggcg
agagcctggggcaccggtcccggcccgtccgcggggctgcggatgcagcaccagctgttc
gacaagctcgtgtactccaagatccgtaccgcgatgggcggcaggatccggcacgccatg
tccggcggctcggcgatggaccggcgcctcggcctgttcttcgcgggcgccggcgtgcac
atctacgaggggtacgggctgaccgagtcgaccgccgcggccaccgccaacccgccggaa
cgcacccgttacggcacggtcggacagccgatccccggggtgagcgtgcacatcgcggac
gacggcgagatctggctgcacggcgagaacgtctttcagggctacctcaacaacccgaag
gccaccgacgagacgctgcacgacggctggctcgccaccggcgacctggggtccgtggac
gaggacggctatctgaccatcaccgggcggaagaaggagatcctggtgacgtccggcggc
aagagcgtctcgccgggcgggctggaggagcgggtgcgcgaccatccgctggtcaaccag
tgcatcgtggtcggcaacgaccgtccgtacgtggccgcgctggtcaccctggaccaggag
gcggtcgagcactggctggccatgcgggggaagcctcagctctccccggccgaactggtg
cgcgacccggatctggagacggaggtgcggcgcgcggtggtcgcggccaacaccctggtc
tcgcaggccgagtcgatccgcaccttccgcatcctggcgcagccgttcaccgaggagcac
gggctgctcaccccgtcgctgaagctgaagcgcaaggccatcgagaaggcgtacaccgac
gaggtcgaggcactgtaccgggcgtga
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