Streptomyces sp. 4F: ASR50_33340
Help
Entry
ASR50_33340 CDS
T04265
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
strf
Streptomyces sp. 4F
Pathway
strf00061
Fatty acid biosynthesis
strf00071
Fatty acid degradation
strf01100
Metabolic pathways
strf01212
Fatty acid metabolism
strf02024
Quorum sensing
strf04146
Peroxisome
Module
strf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ASR50_33340
00071 Fatty acid degradation
ASR50_33340
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ASR50_33340
09145 Cellular community - prokaryotes
02024 Quorum sensing
ASR50_33340
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
strf01004
]
ASR50_33340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
strf04147
]
ASR50_33340
Enzymes [BR:
strf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ASR50_33340
Lipid biosynthesis proteins [BR:
strf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ASR50_33340
Exosome [BR:
strf04147
]
Exosomal proteins
Exosomal proteins of breast milk
ASR50_33340
Exosomal proteins of breast cancer cells
ASR50_33340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
ALV53823
LinkDB
All DBs
Position
complement(7545188..7547104)
Genome browser
AA seq
638 aa
AA seq
DB search
MGVRKDLKRAKRRADLAGRTSVETVRDEHGTVREVRTEVLAAHPVTGTTADVPFTNADEA
PDAVVLRREEGGAWRPVTAAAFAGEVTAVAKGLVAAGLEPGDRVAVMSRTRYEWTLLDFA
IWAAGGQTVPVYPTSSADQVEWIVRDAGVRYVVTETPDNSATVRAGTAALDPAPEVWELD
AGAVDDLVARGRDVPDEEVTKRRTALTADTVATVCYTSGTTGRPKGCVLTHGNLYAESAN
TVELLHPVFKAVTSQVASTLLFLPLAHILGRTLQISCLMARIETGHCPSIKPDELRPALK
SFRPTFVVGVPYLFEKIHDTGRATAEKIGRGASFERAHRIAVRFARAHLDRFLGRGKGPG
PGLYAAWALYDLLVYRRVRKELGGRLRYAISGGSPLEKDLNLFFYASGIMIYEGYGLTET
TAAATVVPPLSPRPGTVGRPVPGTAVRIADDGEVLIKGGIVFGAYRNNPAATEEVLRDGW
FATGDLGSLDEDGYLTITGRKKDIIVTSGGKNVSPAVLEDRLRSRPPVGQCLVVGDNRPF
VAAVVTLDPETVAHWLSVRGMPADTPMSEVVRDPRIRADVQKAVDYANEAVSRAESIRKF
VVVEGEFTEDNGLLTPSLKVKRQAAQEAYAKEIAALYA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtacgcaaggatctgaaacgggcgaaacgacgggccgatctggcgggccgtact
tcggtggagaccgtcagggacgaacacgggaccgtccgcgaggtccgtacggaggtcctg
gccgcgcatcccgtcacgggcacgaccgccgacgtcccgttcaccaacgcggacgaggcg
cccgacgcggtcgtgctgcgccgcgaggaagggggcgcgtggcgcccggtcacggcggcg
gccttcgccggggaggtcaccgccgtggccaagggcctggtcgcggccggtctcgagccg
ggcgaccgggtcgccgtgatgtcccgcacccggtacgagtggacgctcctggacttcgcg
atctgggcggccggcgggcagaccgtgccggtgtacccgacctcctcggcggaccaggtg
gagtggatcgtccgggacgccggcgtccggtacgtcgtcacggagaccccggacaactcc
gccaccgtgcgcgccggcaccgccgccctcgacccggcgcccgaggtgtgggagctggac
gcgggcgccgtggacgacctcgtcgcccggggccgggacgtcccggacgaggaggtcacc
aagcggcgcaccgccctcaccgccgacacggtggcgaccgtctgctacacctccggcacc
acgggacgccccaagggctgcgtgctcacccacggcaacctgtacgccgagtccgcgaac
acggtcgagctgctgcaccccgtcttcaaggccgtcacctcccaggtcgcctcgacgctg
ctgttcctgccgctcgcccacatcctgggccgcaccctgcagatctcctgtctcatggcc
cgcatcgagacggggcactgcccgagcatcaagccggacgaactgcggcccgcgctcaag
tcgttccgccccacgttcgtggtgggcgtgccctacctcttcgagaagatccacgacacc
ggccgggccaccgccgagaagatcgggcggggcgcgtccttcgagcgcgcccaccgcatc
gccgtccgcttcgcgcgggcgcacctcgaccgcttcctcggccgcggcaagggccccggg
cccggcctgtacgccgcatgggcgctgtacgacctgctggtctaccgcagggtccgcaag
gagctaggcgggcgcctgcggtacgccatcagcggcggctccccgctggagaaggacctc
aacctgttcttctacgcgtccggcatcatgatctacgagggctacgggctcaccgagacc
accgccgccgcgaccgtcgtcccgccgctgtccccgcgccccggcacggtcggccggccg
gtcccgggcaccgcggtgcgcatcgccgacgacggagaggtgctgatcaagggcggcatc
gtcttcggcgcgtaccggaacaacccggcggccaccgaggaggtgctgcgcgacggctgg
ttcgccaccggggacctcggctccctcgacgaggacggctacctcaccatcaccggccgc
aagaaggacatcatcgtcacctccggcggcaagaacgtctcccccgccgtgctggaggac
cggctgcgcagccgcccgccggtcgggcagtgcctggtcgtcggcgacaaccggcccttc
gtggccgcggtggtcaccctcgacccggagacggtggcccactggctgtccgtgcgcggg
atgcccgcggacaccccgatgtccgaggtggtccgcgacccgcgcatacgggccgacgtg
cagaaggcggtggactacgccaacgaggccgtctcccgtgcggagtccatccgcaagttc
gtcgtcgtcgaaggcgagttcaccgaggacaacggtctgctcaccccgtcgctgaaggtc
aagcggcaggcggcgcaggaggcgtacgcgaaggagatcgccgcgctgtacgcgtga
DBGET
integrated database retrieval system
