Streptomyces sp. 4F: ASR50_35400
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Entry
ASR50_35400 CDS
T04265
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
strf
Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_35400
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASR50_35400
Archaeal homologous recombinant proteins
ASR50_35400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
MDH
BIg21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ALV54170
LinkDB
All DBs
Position
8035014..8038022
Genome browser
AA seq
1002 aa
AA seq
DB search
MRLHTLRLQAFGPFAGTHTVDFDALSADGLFLLHGDTGAGKSTIFAAICFALYGKPPGDR
DLLLRSHHAPPGLLTEVTLEVTLAGRRLRIHRIPAQKRPKRSGQGETDQKPETRLSEWAV
DANGQGHWEPSSKSHQEAAAEITDLLGMSRDQFCQVVLLPQNEFTKFLHADAHGRRELLG
KLFRTGRFSFIERWLNDHSRTTEKNRDAARADVLRLVERIHQAAGDDLTTESTAPTPDDP
HTLTDPARAWARDLIRASQADHDKALQAANTAKEKLGHQQSLEAAARELHQQQATYNRAQ
QQLDLLQEQAPHHDALVQRRDQARRAQQVAPQLHAADTAADDHTRAQNVERTAREHLQPA
HADLDAGQLETAEQQARAQAAVLTALIPEEDTVRQLTADLKRTDAERQAFADQQRTAQDW
LEEEPTRRRTLEARRETARKAEEEGRRHQAALDILKVRLEAAKRRDAHLAKITQAEQHLA
DAQAATGQAGQAYLTIRRRRTEGMAAELAANLTDGTPCPVCGSCTHPAPAAPQDGQPTRQ
DEQDAEALHEQAKATQDAAAAALHKLREQAATATGEAGDTPLADLQTQHKTLTAELTDAL
ARAADQGTVQEELLALDSEHTAMTQQHSTATAGLSARNASYDTLTQQLTELTAKLAAARG
THPTVAAHADELTRTADRLKEAAEASHHLTTATQTLTHRTTQATHAAKDQGFDTLALAQQ
ALLSDEELHTIEEEITQWREARAAHTTVLENPALQHAAAQPPADLDAATAARAAADDQHA
EAAAAASAAHTRNQALTALAAELETAIQRLKPLEQAHSTARHLAELVTGNSTSARVRMQL
EAYVLAARLEEVVTAANTRLHIMSEGRYTLSHSDHQAARGARSGLGLQITDSWTGRPRKT
DTLSGGESFFASLSLALGLADVVTHEAGGNPLDTLFIDEGFGTLDEDTLHKVLDVLDSLR
AHDRTVGVISHIPELRRRITHRLHVRKDPTGSTLAHLTEAAE
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcacaccctgcgcctgcaggccttcggccccttcgccggcacccacaccgtc
gacttcgacgccctgtccgccgacggcctgttcctcctgcatggcgacaccggagccggg
aagagcaccatcttcgccgccatctgcttcgccctctacggcaaacccccaggcgaccgc
gacctgctgctgcgcagccaccacgctcctcccggcctcctgaccgaagtcaccctggag
gtcaccctcgcgggccgccgcctgcgcatccaccggatccccgcccaaaaacgccccaag
cgatccgggcaaggcgaaactgaccaaaaacccgaaacccggctcagcgagtgggccgtc
gacgccaacggccagggccactgggaaccctccagcaaatcccaccaggaggccgccgcc
gagatcaccgacctgctgggcatgagccgggaccagttctgccaggtcgtcctgctgccg
cagaacgaattcaccaaattccttcacgccgacgcccacggccgacgagaactcctcggc
aaactcttccgcaccggccgcttctccttcatcgaacgctggctcaacgaccacagccgc
accaccgaaaagaaccgcgacgccgcccgcgccgacgtgctgcgcctggtcgaacgcatc
caccaggccgccggagacgacctgacaaccgagtccaccgctcccactcccgacgacccg
cacaccctcaccgacccggcgcgcgcctgggcccgcgacctcatccgcgccagccaggcc
gaccacgacaaggcactccaagcagccaacacggccaaggaaaaactgggccaccagcag
tccctcgaggcggcagcccgcgaactccaccagcagcaagccacctacaaccgcgcccag
cagcaactcgaccttctccaggaacaggccccgcaccacgacgcactcgtccagcgccgc
gaccaggcccgccgggcccagcaggtggcgccccagctgcacgccgcggacaccgccgca
gacgaccacacccgggcccagaacgtcgaacgcactgcccgcgaacacctgcagcccgcc
cacgccgacctggacgccggccagctggaaaccgccgagcagcaggcccgcgcccaggcc
gctgtcctgaccgccctcatcccagaagaagacaccgtccgccagctgaccgccgacctg
aaacgcaccgacgccgaacggcaggccttcgccgaccagcaacgcacagcccaggactgg
ctggaagaggagcccacccggcgccgcaccctcgaagcccggcgagaaaccgcccgcaag
gccgaagaagaaggccgccgccaccaggctgccctggacatcctcaaggtccgcctcgaa
gccgccaaacgccgcgacgcacaccttgccaaaatcacccaggccgaacagcacctggcc
gatgcacaagcagccaccggccaagccggccaggcctacctcaccatccgccgccggcgc
accgaaggcatggccgccgaactcgccgccaacctcaccgacggcaccccctgccccgtc
tgcggatcctgcacccacccagcccctgccgctccccaggacgggcagcccacacgccag
gacgaacaggacgcggaagccctccacgagcaggccaaggccacacaggacgccgccgca
gccgcactgcacaagctccgcgaacaggccgccaccgccaccggcgaggccggcgacacc
ccactggccgacctccaaacacagcacaagacactcaccgctgagttgaccgacgccctg
gcccgtgccgccgaccagggcaccgtccaagaagaactcctcgcgctcgacagcgagcac
acggccatgacccagcagcacagcaccgccacggccggcctgtccgcccgcaacgccagc
tacgacaccctcacccagcagctcaccgagctgaccgccaagctcgccgcagcccgcggc
acccatcccaccgtcgccgcacacgccgacgaactcacccgcaccgccgaccgcctcaaa
gaagccgccgaagcctcccaccacctcaccacagccacccagaccctcactcaccgcacc
acccaggccacccacgccgccaaagaccagggcttcgacaccctggccctcgcccagcaa
gccctgctcagcgacgaagaactgcacaccatcgaggaagagatcacccagtggcgcgag
gcccgcgccgcccacaccacagtcctggagaacccggcactgcaacacgccgccgcacag
ccccccgccgacctcgacgccgccacggccgcacgggccgccgcagacgaccagcacgcc
gaggcagccgccgccgccagcgccgcccacacacgcaaccaggccctcaccgccctcgcc
gccgaactcgagaccgccatccagcgcctgaaaccgctcgaacaggcccacagcaccgcc
cgccacctggccgaactcgtcaccggcaactcaaccagcgcccgggtacgcatgcagctg
gaggcctacgtcctggccgcccgcctcgaagaagtcgtcaccgccgccaacacccgcctg
cacatcatgtccgaaggccgctacaccctctcccactccgatcaccaagccgcccgcggc
gcccgctccggcctcggccttcaaatcaccgactcctggaccggccgcccccgcaagacc
gacaccctctccggcggcgaatccttcttcgcctccctgtccctcgccttgggactggcc
gacgtcgtcacccacgaagccggcggcaaccccctggacaccctcttcatcgacgaaggc
ttcggcaccctcgacgaagacaccctccacaaggtcctcgacgtcctggactccctgcgc
gcccacgaccgcaccgtcggcgtcatcagccacatccccgaactccgccgccgcatcacc
caccgcctgcacgtccgcaaagaccccaccggatccaccctcgcccacctgaccgaagca
gccgaatag
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