Streptococcus troglodytae: SRT_01520
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Entry
SRT_01520 CDS
T06912
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
strg
Streptococcus troglodytae
Pathway
strg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SRT_01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strg03019
]
SRT_01520
03016 Transfer RNA biogenesis [BR:
strg03016
]
SRT_01520
Enzymes [BR:
strg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SRT_01520
Messenger RNA biogenesis [BR:
strg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SRT_01520
Transfer RNA biogenesis [BR:
strg03016
]
Prokaryotic type
tRNA degradation factors
SRT_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
RNase_PH_C
S1_2
PCB_OB
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
SPATA25
BAG6
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BAQ23413
UniProt:
A0A1L7LGU1
LinkDB
All DBs
Position
164345..165865
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AA seq
506 aa
AA seq
DB search
MVKKKADVELLHVDADLQAEIVGKYNADLQKAVQIEEKKTRETATEAVQEHVIAEYEERY
AEHEEHDRIMRDVAEILEQMEHAEVRRLITEDKVRPDGRRVDEIRPLDAEIDFLPKVHGS
GLFTRGQTQALSVLTLAPMGDTQIVDGLDEEYKKRFMHHYNFPQYSVGETGRYGAPGRRE
IGHGALGERALAQVLPSLETFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAP
VAGIAMGLISDGTNYTVLTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIEGITPQILE
EALAQAKKARFEILDVIEEAIPAPRLELAPTAPKIDTIKVDVDKIKIVIGKGGETIDKII
EETGVKIDIDEDGNIAIYSSDQEAINRTKEIIAGLVREAKVGEVYEAEVVRIEKFGAFVN
LFDKTDALVHISEIAWTRTNKVEDVLAVGDKVTVKVVKVDDKGRIDASMKALLPRPPRSE
KSTKDHQSVSHHGSPKDNKGKEEYDK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaagaaaaaagctgacgttgaattgttgcatgtggatgctgatttgcaggctgaa
attgttggaaaatacaatgcggaccttcaaaaggctgttcaaattgaggaaaagaaaacc
cgcgaaactgcaacagaagccgtccaagagcacgtgatcgctgaatacgaagagcgctat
gctgaacacgaggaacatgatcgcatcatgcgcgacgtagctgaaatccttgaacagatg
gaacatgcagaggtccgccgtcttatcacagaagacaaggttcgtcctgacggccgtcgt
gttgatgaaatccgtccgcttgatgcagagattgatttcttgccaaaagtacatggttca
ggtctctttactcgtggacaaacccaggccttatcagtgctaacattggctccaatggga
gatacccaaattgtggacgggcttgatgaagaatataaaaaacgcttcatgcatcattat
aattttccgcaatattcggttggagaaacaggacggtatggagcgccaggacgccgagaa
atcggtcatggtgctcttggtgaacgtgctttggcccaagttctaccaagtttggaaaca
tttccttatgctattcgtttagtagctgaagtgttagaatcaaacggttcctcatcacag
gcttcaatttgtgcgggaacgctcgctcttatggctggtggtgtacctatcaaagcacca
gttgcaggtattgctatgggacttatctcagacggcactaactataccgttttgaccgat
atccaaggactagaagatcactttggcgatatggactttaaagttgcaggtacccgtgaa
ggtatcacagctttgcaaatggatattaagattgagggtattacgccacagattttagaa
gaagctcttgcccaagctaaaaaagcacgttttgaaattcttgatgtgattgaagaagcc
attcctgcaccacgtctagaattagcaccgacagcacctaaaattgacacaattaaagtt
gatgtagataaaatcaagattgtcattggcaagggcggtgaaaccattgataagattatt
gaagaaactggcgttaaaattgatattgatgaagacggtaatattgctatctactctagt
gatcaagaggcgattaatcgtactaaggaaattattgcaggtttggtacgtgaagctaag
gttggtgaagtttatgaggctgaagttgtccgtattgagaaattcggtgcttttgtgaat
ctttttgataagacagatgcactcgttcatatctctgagatagcttggacccgcacgaat
aaagtagaagatgttttggctgttggggataaggttacggtcaaagttgttaaagtagat
gataagggccgtattgatgcttctatgaaagctttattaccacgtccgccaagatctgaa
aagtcaactaaggaccatcaatctgtcagtcatcatggttctcctaaagacaataaaggt
aaagaagaatatgataaataa
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