Streptococcus troglodytae: SRT_15120
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Entry
SRT_15120 CDS
T06912
Name
(GenBank) ATP-dependent RNA helicase, DEAD-box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
strg
Streptococcus troglodytae
Pathway
strg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SRT_15120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strg03019
]
SRT_15120
03009 Ribosome biogenesis [BR:
strg03009
]
SRT_15120
Enzymes [BR:
strg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SRT_15120
Messenger RNA biogenesis [BR:
strg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SRT_15120
Ribosome biogenesis [BR:
strg03009
]
Prokaryotic type
rRNA helicases
SRT_15120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAQ24773
UniProt:
A0A1L7LKP2
LinkDB
All DBs
Position
complement(1524752..1526305)
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AA seq
517 aa
AA seq
DB search
MKFTELHLAEDILSAVAKVGFVEPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIDVTNNVVQALVIAPTRELAVQSQEELFRFGREKKVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLNHVETLILDEADEMLNMGFLEDIEAIISRVPETRQTLLF
SATMPDAIKRIGVKFMKEPEHVKIAAKELTTDLVDQYYIRIKENEKFDTMTRLMDVEQPE
LSIVFGRTKRRVDELTRGLKLRGYRAEGIHGDLDQGKRLRVLRDFKNDNLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKHGQSITFVAPNEMGYLQIIEKLTKK
RMKGMKPATAQEAFQASKKVALKKIERDFADEKIRSNFDKFTKAAEKLAAEFSPEELAQY
ILTLTVQDPEMLPKVEIAREKPLPFKFAGKGKGGNRRREDRRGGRDSRRNHRDGGRREFK
RISNKNRKDFENKSNKRPHRTSSEKKSGFTIRNKGDR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaattacatttagcagaagacattctttctgccgttgcaaaagtcggc
tttgttgagccatcacccatccaagaattgactattcctcttgctcttgaaggaaaagat
gttattggtcaagcacagactgggacaggcaaaacagcggcttttggcctaccaactcta
aacaagattgatgtgactaataatgttgttcaggctcttgttattgcgccaacacgagaa
ttagccgttcaaagtcaagaagagctcttccgttttgggcgtgaaaagaaagttaaagtt
cgttcggtttatggtggttcaagcattgaaaagcaaatcaaagctcttaaatcgggtgcc
catattgttgttggaacaccgggacgtctgcttgatttgattaaacgtaaggcgcttaaa
ttaaatcatgtggaaacccttattttagatgaagcagatgaaatgcttaacatgggcttt
ttagaagatattgaagctattatttcgcgtgttcctgaaacacgtcaaactttactcttt
tcagcaaccatgcccgatgctattaaacgtattggcgtaaagtttatgaaagagccagaa
catgttaagattgctgccaaagaattaacaacagatttagttgaccaatattatattcgc
atcaaagaaaatgaaaaatttgatacgatgacccgtcttatggatgtggaacagccagag
ctttctatcgtttttggccgtactaagcgccgtgttgatgagttaacaagaggattaaaa
ctgcgtggctatcgtgcggaaggtatccatggagatctcgaccaagggaaacgtctgcgt
gtccttcgtgattttaaaaatgacaaccttgatattttggttgcgacagatgtagcggct
cgtggtctcgatatttcgggcgtcactcatgtttataactatgatattccgcaagaccct
gaaagctatgttcaccgtattggtcgtacgggtcgtgctggtaagcacggtcagtccatt
acttttgtggctcccaatgaaatgggctatcttcaaattattgaaaagctcactaaaaaa
cgcatgaaaggcatgaaacctgctacagcgcaagaagcctttcaagcaagcaaaaaagtg
gccctcaaaaagattgagcgtgactttgctgatgaaaagattcgttctaattttgataag
tttaccaaagctgctgaaaaattggctgctgaattttcaccagaagaattagcacaatat
attttgactctaactgttcaagatccagaaatgctgcctaaggttgaaattgctcgcgaa
aaacccttgccatttaaatttgctggtaaaggaaagggcggcaatcgtcgtcgtgaggat
cgtcggggaggtcgcgacagtcgccgtaatcatcgtgacggtggccgtcgtgaatttaaa
cggatttctaacaaaaatcgcaaagattttgaaaataagagcaataaacgtcctcaccgt
acttccagcgaaaagaaaagcggctttaccattcgcaataaaggtgacagataa
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