Streptococcus troglodytae: SRT_16410
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Entry
SRT_16410 CDS
T06912
Name
(GenBank) HAD-superfamily hydrolase/phosphatase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
strg
Streptococcus troglodytae
Pathway
strg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SRT_16410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strg03019
]
SRT_16410
Messenger RNA biogenesis [BR:
strg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SRT_16410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
E3_UbLigase_EDD
KH_KhpA-B
KH_2
PA26
EpuA
dUTPase
Motif
Other DBs
NCBI-ProteinID:
BAQ24902
UniProt:
A0A1L7LLJ2
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Position
complement(1653397..1655004)
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AA seq
535 aa
AA seq
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MLNILLTLVFSLIGLVIGYAVISARLKKAKETAELTLLNAEQDAVNARSKAEMDAEHIKK
TAERESKAYKKELLIEAKEEARKYREEIEKEFKSERQELKQMDARLTERAASLDRKDENL
SSKEQLLDNKEQSLSDKSRHIDERELQVKQLEVKKAEELEKIASLSQEQARGIILSETEK
NLAHDIANRIKEAEREIKDRTDKTAKDLLAQAMQRLAGDYVAEQTITTVHLPDDSMKGRI
IGREGRNIRTLESLTGIDIIIDDTPEVVVLSGFDPIRREIARMTLEALIQDGRIHPARIE
ELVEKNRLEMDNRIREYGEAAAFEIGAPNLHPDLIKLMGRLQFRTSYGQNVLRHSVEVGK
LAGLLASELGENVDLARRAGFLHDIGKAIDREVEGSHVEIGTEFARKYKENPVVINTIAS
HHGDVEAQSVIAVLVAAADALSSARPGARNESMENYIKRLRDLEEIATSFDGVQNSYALQ
AGREIRIMVQPEKLSDDDVTILAHKVREKIENNLDYPGNIKVTVIRELRAIDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatattcttttaactcttgttttctccctcattggtttggttattggttatgca
gttatttcggctcgtttaaagaaagctaaagaaaccgcagaactgactcttttaaatgca
gaacaagatgctgttaatgctcgcagtaaagctgaaatggatgctgagcatatcaaaaaa
acagcagaacgtgaaagtaaggcctataaaaaggaactgcttatagaagcaaaagaagag
gctagaaaatatcgcgaagagattgaaaaagaatttaagtctgaaagacaagagctcaaa
caaatggatgcgcgtttgacagagcgtgcagcatctcttgatcgtaaagatgaaaatcta
agcagcaaagaacaattgcttgataataaagagcaaagtctatccgataaatctaggcat
attgatgagcgtgaactacaagttaaacaattagaagttaaaaaggctgaggaacttgag
aaaatagcatccttaagtcaagaacaagcacgcggcattattctttcggaaacagagaaa
aatttagcgcatgatattgcgaatcgtattaaagaagcagagcgcgaaatcaaagatagg
acggataaaacagctaaagatttgttagctcaggctatgcaacgtctagcaggagattat
gtagctgaacagaccattacgacagttcatctccctgatgatagcatgaaaggtcgtatt
atcggccgcgaagggcgtaatatccgaacgcttgagagcttaacagggattgatattatt
attgacgacacaccagaggtggttgttttatcaggctttgatcctattcgtcgagaaatt
gctcgtatgactttagaagcgcttatccaagatggccgtattcatcctgctcgaattgaa
gaattagttgaaaaaaatcgactggagatggataatcggattcgtgaatatggtgaagct
gctgcctttgaaattggcgctcctaatcttcatcccgacttgattaaattgatgggacgt
ttgcaatttagaacgtcttatggtcaaaatgttcttcgccattctgttgaagttggtaaa
ttagctggacttttggccagtgaattaggtgaaaatgttgatttagctcgccgcgctggt
tttctacacgatattggaaaagctatcgaccgtgaggttgaaggcagccatgttgaaatt
ggaacagaatttgctcgtaaatacaaggaaaatcctgttgtgattaacactattgccagt
caccatggtgatgtggaagcgcaatcggtcattgctgttttagttgctgctgctgatgca
ctcagttcagctcgtccgggtgctcgcaatgagtctatggaaaattacatcaagcgtctg
cgtgatttggaagaaatagcaacaagctttgatggtgttcaaaatagctatgccttgcaa
gcaggccgtgaaattcgtattatggttcagccagaaaaactttctgatgatgatgtcacc
attttagctcacaaggttcgtgaaaaaattgaaaataatttggattatccaggtaatatt
aaggttacagtcattcgtgaacttcgtgcgattgattatgctaaataa
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