Streptococcus troglodytae: SRT_16590
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Entry
SRT_16590 CDS
T06912
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
strg
Streptococcus troglodytae
Brite
KEGG Orthology (KO) [BR:
strg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strg03019
]
SRT_16590
03009 Ribosome biogenesis [BR:
strg03009
]
SRT_16590
Enzymes [BR:
strg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SRT_16590
Messenger RNA biogenesis [BR:
strg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SRT_16590
Ribosome biogenesis [BR:
strg03009
]
Prokaryotic type
rRNA helicases
SRT_16590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Alp7A_like_C
PrpR_N
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
BAQ24920
UniProt:
A0A1L7LLD4
LinkDB
All DBs
Position
complement(1671344..1672687)
Genome browser
AA seq
447 aa
AA seq
DB search
MLFTDFKFKNYINNALTNLHFEVPTQVQERLIPLILSGKDLVGESKTGSGKTHTFLLPIF
EKLEEDSLDVQAVITAPSRELARQIYEAAKQIADFSKQDIRLANYVGGTDKLRQIEKLKA
SQPQIVIGTPGRIYDLVKSGHLDIHKAHTFVVDEADMTLDMGFLDTVDKIATSLPKDIQI
LVFSATIPQKLQPFLKKYLNHPIIEKIKTSTVIADTISNWLISTKGRDKNQQILEIVKSL
NPYLAIIFANTKERADELHAFLSVNGLKIAKIHGGIPPRERKRIMNQVKQLDFEYIVATD
LAARGLDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSEVRELEKL
GIVFIPKVLKNGEFQDTYDRDRRLNREKTQEKLDLEMIGLVKKKKKKIKPGYKKKIQWKV
NEKRRKERRFVKRATNRADRKAKKQRF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttatttacggattttaaatttaaaaattatattaacaatgctttgacaaacttacat
tttgaagtaccgacgcaggttcaagaacgcctgattccacttattttgtctggaaaagat
ttggttggtgaatcaaaaacagggtcaggaaagacccatacgtttttgctgcctattttt
gaaaaattagaagaagattctttagatgttcaggctgttattactgcaccaagtcgtgaa
ttggctagacaaatttatgaagctgctaagcaaattgctgatttttcaaagcaagatatt
cggcttgctaattatgttggcggaacggataaacttcgtcaaattgaaaaactaaaagca
agtcagccacagattgtgattgggacaccgggtcgtatttatgatctggttaaatctgga
catcttgatatccataaagctcatacttttgttgtggatgaagcagatatgactcttgat
atgggcttcttagatacagttgataagattgctacaagtttgcccaaggacatacagatc
cttgttttttcagcaaccattcctcaaaaactacagccttttttgaaaaaatatctaaat
catcctattatagaaaaaatcaagaccagtacagtcattgcagataccattagcaattgg
ctgatttcaactaagggacgtgataaaaatcagcaaatattagagattgtaaagagtttg
aatccttatttggctattatttttgccaataccaaagaacgtgccgatgagctgcatgct
ttcttgtctgtaaatggtcttaagattgcaaaaattcatgggggaattccgccgcgtgaa
cgtaagcggattatgaatcaagttaagcaactggattttgaatacattgtagcgacagat
ttagctgcacgtggcttagatattgaaggtgttagtcatgtgattaatgatgcgattcct
caagatttatctttctttgttcaccgtgttggccgaacaggccgcaatggtctttctggt
acagctatcacgttatatcagcccagtgatgattctgaggtcagagaacttgagaagtta
gggatagtctttattcctaaagtcttaaaaaatggggagtttcaggatacttatgatcgt
gatcggcgcctcaatcgtgagaaaacgcaggaaaaactggatctggaaatgattggtctg
gtcaaaaagaaaaagaagaaaatcaaaccaggatacaagaagaaaattcagtggaaagtt
aatgaaaaacgtcgtaaggaacgccgttttgttaaacgtgctacaaatcgtgctgatcgt
aaagctaaaaaacaacgtttttga
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