Streptacidiphilus sp. P02-A3a: GXP74_02425
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Entry
GXP74_02425 CDS
T08580
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
strh
Streptacidiphilus sp. P02-A3a
Brite
KEGG Orthology (KO) [BR:
strh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strh03032
]
GXP74_02425 (topA)
03400 DNA repair and recombination proteins [BR:
strh03400
]
GXP74_02425 (topA)
Enzymes [BR:
strh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GXP74_02425 (topA)
DNA replication proteins [BR:
strh03032
]
Prokaryotic type
DNA Topoisomerases
GXP74_02425 (topA)
DNA repair and recombination proteins [BR:
strh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GXP74_02425 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QMU67233
LinkDB
All DBs
Position
519650..522535
Genome browser
AA seq
961 aa
AA seq
DB search
MSPTSETGREGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPGTAAEVPDGYTGE
VRRLGIDVEHDFEPIYVVNADKKAQVAKLKSLLKDSDELFLATDEDREGEAIAWHLQEVL
RPKVPVHRMVFHEITKDAIQAAVNSPRELNKRLVDAQETRRILDRLYGYEVSPVLWKKVM
PKLSAGRVQSVAIRLVVERERERIAFRSASYWDLTAVFASATAIDGDPGTFGARLSAVDG
RRVASGRDFDSLGQLKAASGQALHLDEEAARALAAGLADTDFRVRSVESKPYRRSPYAPF
RTTTMQQEAGRKLGFAAKRAMDVAQKLYENGFITYMRTDSTTLSETAVKAARAQVEQLYG
REYLPDTPRVYSAKVKNAQEAHEAIRPSGDRFRTPAETGLRGDEFRLYELIWMRTVASQM
KDAVGQSVTVKVAGTSTDGRDAEFSATGKIITFHGFLKAYVEGRDDPDAELDDRERRLPP
VAEGDALGAEEITPDGHATKPPARFTEASLIKELEDREIGRPSTYAAIIDTIVARRYVFK
KGTALVPSFVALAVVRLLEEHFGRLVDYDFTARMENDLDGIARGESASVPWLRRFYYGRS
GPEDVAAPAVASAADAGNGDGDHLGGLKELVTDLGAIDAREISSFPLGDSGIVLRVGRYG
PYVEKGEQRADVPEELAPDELTVELAEELLAKPSGVRELGTDPESGNEIVAKDGRYGPYF
TEVLPEGTPKTGKNAVKPRTQSLLSTMSLDTVTLDDALKVFGLPRVVGTDAEGVEITAQN
GRYGPYLKKGTDSRSLENEEQMFTVTLEEALAIYATPKQRGRAAAKPPLRELGVDPVSER
PVVVKDGRFGAYVTDGETNATLRRDDVVEEITPERGYELLAEKRAKGPVKKVAKKAPAKK
AAAKKAPAKKATATKTTATKTTAKKTTAKTAAAKTATAKKAPAKKSAAEVPDADRATASA
D
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccgaccagcgagaccggacgcgaaggaaggcgactcgtgatcgtcgagtcgccg
gccaaggcgaagacgatcaagggctacctcggccccggatacgtggtcgaggcgagcgtc
gggcatatccgcgacctgcccggcaccgccgccgaggttcccgacggctacaccggcgag
gtgcgccgcctgggcatcgacgtcgagcacgacttcgagccgatctatgtcgtcaacgcc
gacaagaaggcccaggtcgcgaaactcaagtcgctgctgaaggactccgacgaactcttc
ctcgcaacggacgaggaccgcgagggcgaggccatcgcctggcacctgcaggaggtgctg
cgacccaaggtcccggtgcaccgcatggtgttccacgagatcaccaaggacgccatccag
gccgccgtcaacagcccgcgcgagctgaacaagcgcctggtcgacgcccaggagacccgc
cgcatcctggaccggctgtacggctacgaggtctcgccggtgctctggaagaaggtcatg
ccgaagctctcggcgggccgggtccagtccgtggcgatccggctggtggtcgagcgcgag
cgggagcggatcgccttccgctcggcgtcctactgggacctgaccgcggtcttcgcctcg
gccaccgccatcgacggcgacccgggcaccttcggcgcccggctgtccgcggtggacggc
cgccgggtggcctccggacgcgacttcgactcgctcggacagctcaaggcggcctccggg
caggccctgcacctggacgaggaggccgcccgggccctggccgccgggctcgccgacacc
gacttccgggtccgcagcgtcgagtcgaagccgtaccggcgctcgccgtacgcgccgttc
cggaccacgaccatgcagcaggaggccgggcgcaagctgggcttcgccgccaagcgggcc
atggacgtcgcccagaagctgtacgagaacggcttcatcacctacatgcgtaccgactcg
accacgctgtcggagaccgccgtcaaggcggcccgcgcccaggtcgagcagctgtacggg
cgggagtacctgccggacaccccccgggtctacagcgccaaggtcaagaacgcccaggag
gcgcacgaggcgatccgcccctccggcgaccgcttccgcacccccgccgagaccggcctg
cgcggcgacgagttccggctctacgagctgatctggatgcgcaccgtcgcctcccagatg
aaggacgccgtcggccagtcggtcaccgtcaaggtcgccggtacctccaccgacggccgc
gacgccgagttctccgccaccggcaagatcatcaccttccacggcttcctcaaggcctac
gtcgagggccgcgacgaccccgacgccgaactggacgaccgcgagcgccggctgccgccg
gtcgccgagggggacgccctgggcgcggaggagatcacccccgacggccacgcgaccaag
cccccggcccgcttcaccgaggcgtcgctgatcaaggagctggaggaccgcgagatcggc
cgtccctccacctacgccgcgatcatcgacaccatcgtcgcccgccggtacgtcttcaag
aagggcacggcactcgtcccctccttcgtggcgctggccgtggtccggctgctggaggag
cacttcggccgcctggtcgactacgacttcaccgcccggatggagaacgacctcgacggc
atcgcccggggcgagagcgcctcggtgccctggctgcgccgcttctactacggccgttcc
gggccggaggacgtcgccgccccggccgtcgcctccgccgccgacgcgggcaacggcgac
ggcgaccacctcggcggcctcaaggaactggtcaccgacctgggcgcgatcgacgcccgc
gagatcagctccttcccgctcggcgacagcggcatcgtgctgcgggtcggccgctacggc
ccctacgtggagaagggcgagcagcgcgccgacgtccccgaggagctggcgcccgacgag
ctcaccgtggaactcgccgaggagctgctggccaagcccagcggcgtgcgcgagctgggc
accgacccggagagcggcaacgagatcgtcgccaaggacggccgctacggcccctacttc
accgaggtgctgcccgagggcacgccgaagaccggcaagaacgcggtcaagccgcgcacc
cagtcgctgctgtcgaccatgtccctggacacggtcaccctggacgacgcgctcaaggtc
ttcggcctgccgcgggtcgtcggcaccgacgccgagggcgtggagatcaccgcgcagaac
ggccgctacggcccgtacctcaagaagggcaccgactcgcgctccctggagaacgaggag
cagatgttcacggtgaccctggaggaggcgctggcgatctacgcgacgcccaagcagcgc
gggcgcgccgccgccaagccgccgctgcgcgagctgggcgtggacccggtcagcgagcgt
ccggtggtggtcaaggacggccgcttcggggcctatgtgaccgatggtgagaccaatgcc
acactgcgccgggacgacgtggtcgaggagatcaccccggagcgcggctacgagctgctg
gccgagaagcgggccaagggtccggtgaagaaggtcgccaagaaggccccggcgaagaag
gcggcggcgaagaaggcccccgccaagaaggccaccgccaccaagaccaccgccaccaag
acgaccgccaagaagacgacggccaagaccgctgccgccaagaccgccactgccaagaag
gctccggccaagaagtcggcggcggaggttcccgacgccgaccgggcgaccgcctccgcc
gactag
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