Streptacidiphilus sp. P02-A3a: GXP74_03865
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Entry
GXP74_03865 CDS
T08580
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
strh
Streptacidiphilus sp. P02-A3a
Pathway
strh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
strh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GXP74_03865
09124 Replication and repair
03420 Nucleotide excision repair
GXP74_03865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strh03021
]
GXP74_03865
03400 DNA repair and recombination proteins [BR:
strh03400
]
GXP74_03865
Enzymes [BR:
strh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXP74_03865
Transcription machinery [BR:
strh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GXP74_03865
DNA repair and recombination proteins [BR:
strh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GXP74_03865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QMU67487
LinkDB
All DBs
Position
complement(819290..820933)
Genome browser
AA seq
547 aa
AA seq
DB search
MDGPLIVQSDKTLLLETSHPRAGDCRRAIAPFAELERAPEHVHTYRVTPLGLWNARAAGH
DAEQVVDALVSFSRYPVPHALLVDVADTMDRYGRLTLSKHPVHGLVLTTTDRPVLEEVLR
SKKIIPLVGARLDPDTVAVHPSERGQIKQVLLKLGWPAEDLAGYVDGEAHPIELEQDGWE
LRPYQQQAVEGFWHGGSGVVVLPCGAGKTLVGAAAMATAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVMTTKRKGVYAHLELFDSRDWGLVVYDEVH
LLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCCEVRVTLTDHERLAYATAEPEERYRFCATTATKRRVTQALVEKHRGVPTLVIGQYIDQ
LDELGEALNAPVIKGETSNPQREKLFDAFRNGEITVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHTAHFYSVVARDTVDQDFAAHRQRFLAEQGYAYRIVDA
DDVLQAD
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtggacggtccactcatcgtgcaatcagacaagaccctgttgctggagaccagccacccc
agggccggcgactgccgccgggcgatcgctccgttcgcggagctggagcgggcccccgag
cacgtgcacacctaccgggtcaccccgctcgggctgtggaacgcccgggccgccgggcac
gacgcggagcaggtggtcgacgcgctggtcagcttctcccgctacccggtgccgcacgcg
ctgctggtggacgtcgccgacaccatggaccggtacgggcggctgacgctgtccaagcac
cccgtccacgggctggtgctgaccaccaccgaccggccggtgctggaggaggtgctgcgg
tcgaagaagatcatcccgctggtcggcgcgcggctcgaccccgacaccgtcgccgtgcac
ccctccgagcgcggccagatcaagcaggtgctgctgaagctcggctggcccgccgaggac
ctggccgggtacgtcgacggcgaggcgcacccgatcgagctggagcaggacggctgggag
ctgcgcccctaccagcagcaggcggtcgagggcttctggcacggcggctccggcgtcgtg
gtgctcccctgcggggccgggaagaccctggtcggggccgccgcgatggccaccgccaag
gccaccacgctgatcctggtgaccaacaccgtctcggcccggcagtggaagcacgagctg
gtcaagcggacctcgctgaccgaggacgagatcggcgagtacagcggcacccgcaaggag
atccgcccggtcaccatcgccacctaccaggtgatgacgaccaagcggaagggcgtctac
gcgcacctggagctgttcgactcccgtgactggggcctggtcgtctacgacgaggtgcac
ctgctgcccgcgccgatcttccggttcaccgccgacctccaggcgcggcggcggctgggc
ctgaccgcgaccctggtccgcgaggacggccgcgagggcgacgtcttctcgctgatcggt
cccaagcgcttcgacgcgccgtggaaggagatcgaggcccagggctacatcgcgcccgcc
gactgctgcgaggtccgggtcaccctgaccgaccacgagcggctggcgtacgccaccgcc
gagccggaggagcgctaccgcttctgcgcgaccacggcgaccaagcgccgggtcacccag
gccctggtggagaagcaccggggtgtgccgacgctggtcatcggccagtacatcgaccag
ctggacgagctcggcgaggcgctgaacgccccggtgatcaagggcgagaccagcaacccg
caacgggagaagctgttcgacgcgttccggaacggcgagatcaccgtgctggtggtgtcc
aaggtcgccaacttctccatcgacctgcccgaggccaccgtggccatccaggtgtccggc
accttcggctcccggcaggaggaggcgcagcgcctgggccgggtgctgcggcccaaggcg
gacgggcacaccgcgcacttctactcggtcgtcgcccgcgacaccgtcgaccaggacttc
gccgcgcaccggcagcggttcctggccgagcaggggtacgcctaccggatcgtcgacgcg
gacgacgtgctccaggccgactga
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