Streptacidiphilus sp. P02-A3a: GXP74_05455
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Entry
GXP74_05455 CDS
T08580
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
strh
Streptacidiphilus sp. P02-A3a
Pathway
strh03420
Nucleotide excision repair
strh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
strh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GXP74_05455
03430 Mismatch repair
GXP74_05455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strh03400
]
GXP74_05455
Enzymes [BR:
strh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXP74_05455
DNA repair and recombination proteins [BR:
strh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GXP74_05455
MMR (mismatch excision repair)
Other MMR factors
GXP74_05455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QMU67757
LinkDB
All DBs
Position
1177346..1180612
Genome browser
AA seq
1088 aa
AA seq
DB search
MSPAITSPEQLRQLLGIPFTAEQTRAITAPLAPAVIVAGAGSGKTTVMAARVVWLVGTGQ
VRPEQVLGLTFTNKAAGELAERVRKALVQAGVVDLDPVAADDVLGEPEISTYHAFAGRLL
KDHGLRIGLEPDVRLLADATRYQLAARVLRQAPGPYPALTGSFSTLIDSLLTLDGELAEH
LVVPERLQQYDRALLAALDRARLSNDDLRKVPRTAAARIELADLVGRYRARKSEAGLMDF
GDQIAACARLAQGHPEVARLLRAQFRVVLLDEYQDTSVAQRLLLSGLFGAGTGAGTDGGG
GGGGHPVTAVGDPCQAIYGWRGASVANLDDFPRHFPQADGSPAERYSLSENRRSGGRLLD
FANGLAAPLRELHQGVSALRPAPGAEHEGFLRCALLDTHDQEVAWLADSIAHLVRTGTRP
GRIAVLCRAGRDLFPDMHAALVARDVPVEVVGLSGLLNLPEVADLVATCEVLQDPTANAA
LVRLLIGPRWRIGPRDLAVLGRRAQALVRVHGGPGGGGQDRLAEAVAGTDPTEVVSLADA
LESFLHPDSRGEPELPVSPEARARFAQLAAEIRDLRRALAEPLMDVLHRVLAVTGLEVEL
SASPHALAARRKETLNAFLDVAAGFADLDGDPSLAAFLGFLRAAQEFDRGLDSTLPGGDD
TVKVLTVHKSKGLEWDVVAVPGLVKGAFPAEKGRERWTSRPEVLPHDLRGDAPTLPGTPP
WTGTGMKAFTAEMKEHAATEELRLGYVAFTRPRELLLASGHWWGPSQKRPRGPSPFLEAL
RDHCERGTGGEIEVWAPTPAADAENPSLARTADHPWPLPLDQDAQAARRRAGLRVLAGLR
GEQQPREPELVPEEQRLVGSWDRDLEALTGELLRSRAGRRDVPLPAALSASQLLRLAADP
DGFARELARPMPRPPQPAARRGTRFHDWVEARFEPLLLVGEDALPGAEEDLVEDERDLAR
LKEAFLGTPYAALTPHRVESPFQLLLAGRVVRGRIDAVYRTGPESYEVVDWKTHLRETAD
PLQLAVYRLAWAESLGLPLERVSAAFLYVRSGRVVRPAPLPGRAELEGLLTGITPNERPM
DGDTTGTL
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccagccatcaccagcccggagcagctcaggcagctcctcggcatcccgttcacc
gcggagcagacgcgcgcgatcaccgcgccgctcgcccccgcggtcatcgtcgcgggcgcg
ggctcgggcaagaccacggtgatggcggcccgggtggtctggctggtcggcaccggccag
gtccgacccgagcaggtactcgggctgaccttcaccaacaaggccgccggggagctggcc
gaaagggtccgcaaggccctggtccaggccggggtggtcgatctggacccggtcgcggcc
gacgacgtcctcggcgagccggagatctccacctaccatgccttcgccgggcggctgctg
aaggaccacggcctgcggatcgggctggagccggacgtccggctgctcgccgacgccacc
cgctaccagctcgcggcccgggtgctgcgccaggcccccggcccctacccggcgctgacc
ggctccttctccaccctgatcgacagcctgctgacgttggacggcgaactcgccgagcac
ctggtcgtcccggagcggttgcagcagtacgaccgggcgctgctggccgcgctcgaccgg
gcccggctcagcaacgacgacctgcgcaaggtgcccaggaccgccgccgcccggatcgag
ctcgcggacctggtcggccgctaccgggcccgcaagagcgaggccgggctgatggacttc
ggcgaccagatagcggcctgcgcccggctggcccaggggcaccccgaggtcgcccggctg
ctgcgcgcgcagttccgggtggtgctgctggacgagtaccaggacacctcggtcgcccag
cggctgctgctgtccggcctcttcggcgcggggacgggcgccggaaccgacggcgggggc
ggcgggggcgggcatccggtgaccgccgtcggcgacccgtgccaggccatctacggctgg
cgcggggcctcggtggccaacctcgacgacttcccgaggcacttcccgcaggccgacggc
agccccgccgagcgctactcgctctcggagaaccgccgcagcggcggtcggctgctggac
ttcgccaacggcctggccgcgccgctgcgggagctgcaccagggcgtctcggcgctgcgc
ccggcgccgggggcggagcacgagggcttcctgcgctgcgccctgctcgacacccacgac
caggaggtggcctggctcgccgactccatcgcgcacctggtccgcaccggcacccgcccg
ggccggatagccgtgctctgccgggccgggcgggacctcttcccggacatgcacgccgcc
ctggtcgcccgggacgtcccggtcgaggtggtcggcctgtccgggctgctgaacctgccc
gaggtcgccgacctggtcgccacctgcgaggtgctgcaggacccgacggccaacgcggcg
ctggtgcggctgctgatcggcccgcgctggcggatcggcccgcgcgacctggcggtgctc
ggccgccgcgcgcaggccctggtccgggtgcacggcgggcccggcggcggcggtcaggac
cggctggcggaggcggtggccgggaccgacccgacggaggtggtctcgctcgccgacgcc
ctggagagcttcctgcacccggacagccggggcgagcccgagctgccggtctcgccggag
gcccgggcccgcttcgcgcagctggcggcggagatccgggacctgcgccgggcgctggcc
gagccgctgatggacgtcctgcaccgggtgctcgcggtgaccggcctggaggtggagctc
tccgcctcgccgcacgccctggccgcccgccgcaaggagaccctgaacgccttcctggac
gtcgcggcgggcttcgccgacctcgacggcgacccctcgctggcggccttcctcggcttc
ctgcgcgcggcccaggagttcgaccggggcctggacagcaccctccccggcggcgacgac
acggtgaaggtgctcaccgtgcacaagtccaagggcctggagtgggacgtcgtggccgtg
cccggcctggtcaagggggccttcccggcggagaagggccgcgagcgctggaccagccgc
cccgaggtgctgccgcacgacctgcgcggcgacgcgccgaccctgcccggcaccccgccg
tggaccgggaccgggatgaaggcgttcaccgccgagatgaaggagcacgccgccaccgag
gagctgcgcctcggctacgtcgccttcacccgcccccgggagctgctgctggcgtccggc
cactggtggggcccctcgcagaagcgcccgcgcgggccctcgccgttcctcgaagcgctg
cgcgaccactgcgagcgcgggaccggcggcgagatcgaggtctgggcgccgaccccggcg
gcggacgcggagaacccctcgctggcccgtaccgccgaccacccctggccgctgccgctg
gaccaggacgcgcaggccgcccgccgccgggccggcctgcgggtgctggcgggcctgcgc
ggcgagcagcagccgcgggaaccggagctggtcccggaggagcagcggctggtcggctcc
tgggaccgcgacctggaggcgctgaccggggagctgctgcggtcccgggccgggcgccgg
gacgtcccgctgcccgccgcgctgtccgcctcccagctgctgcggctcgcggccgatccg
gacggcttcgcccgggagctggcccggccgatgccgcgtccgccgcagcccgcggcgcgt
cgcggcacccgcttccacgactgggtggaggcccgcttcgagccgctgctgctggtcggc
gaggacgccctgcccggcgccgaggaggacctggtcgaggacgagcgcgacctggcccgg
ctcaaggaggcgttcctgggcaccccgtacgccgcgctgaccccgcaccgggtggagtcg
ccgttccagctgctgctggccgggcgggtggtgcgtggccggatcgacgcggtctaccgc
accggtccggagagctacgaggtggtcgactggaagacccacctgcgggagaccgccgat
ccgctgcaactggcggtgtaccggctggcctgggcggagtcgctggggctgccgctggag
cgggtctcggcggccttcctctacgtccgcagcgggcgggtggtccgtcccgcgccgctg
ccgggccgggcggaactggaaggtctgctcaccggcattactccgaacgagcggcctatg
gatggtgataccacgggaactttgtga
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