Streptacidiphilus sp. P02-A3a: GXP74_10395
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Entry
GXP74_10395 CDS
T08580
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
strh
Streptacidiphilus sp. P02-A3a
Pathway
strh03030
DNA replication
strh03430
Mismatch repair
strh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GXP74_10395 (dnaE)
03430 Mismatch repair
GXP74_10395 (dnaE)
03440 Homologous recombination
GXP74_10395 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strh03032
]
GXP74_10395 (dnaE)
03400 DNA repair and recombination proteins [BR:
strh03400
]
GXP74_10395 (dnaE)
Enzymes [BR:
strh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GXP74_10395 (dnaE)
DNA replication proteins [BR:
strh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GXP74_10395 (dnaE)
DNA repair and recombination proteins [BR:
strh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GXP74_10395 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QMU68582
LinkDB
All DBs
Position
complement(2320026..2323586)
Genome browser
AA seq
1186 aa
AA seq
DB search
MADSFVHLHVHTEYSMLDGAAKNGKLIAEVERQGMPAVAMSDHGNMFGAYEFFQTAKKTG
GVKPIIGIEAYVAPESRFHKKQVFWAPGGQRVASADGEGGKDVSGGGRYTHMTMWAQNAE
GLRNLFKLSSLASMEGYYMKPRMDRELIAANAKGIIATTGCPSGEVQTRLRLGQYDEAVK
AADAYQQIFGKENYFLELMDHGLDIERGVREDLLRLAKALDIPLLATNDSHYVTEDQADA
HDNLLCVGVGKNKDDPNRFKFNGSGYYIKTSEEMRELFRELPEACDNTLAIAERIEPYDE
VFTYVDRMPQFDVPEGETQASWLRHKIAEGLPRRYGDAPSQEVLDRIELEMGVISPMGFD
AYFLVVADICQYARDNGIPVGPGRGSAAGSIVAYLTRITELDPLEHDLLFERFLNPERIN
PPDVDIDFDDRQRDQMVRYVTEKYGEAYTAQVNTFGTIKAKAAVKDANRILGYPFSMGDR
ITKAMPPDVMGKGVPLYALFDESHPRYSEGGEIRAMYENEPDVKKIIDTGKGIEGLTRGT
GVHAAAVILSSVPLLDLIPLHKRDKDGVIITGFSYPQCEDMGLIKMDFLGLRNLGIIDHA
IKIIKANRGVAVDTEKIPLDDPVTYDLLARGDTLGVFQLDGGPMRALLKLMKPTEFADIS
AVSALYRPGPMGMNSHTNYALRKNAMQEITPIHPELEEPLKDVLGPTYGLIVYQEQVQRA
AQVLAGYSLGQADLLRRAMGKKKKEVLEQEFVPFHAGCKERGYSDEAIQAVWDVLVPFAG
YAFNKSHSAAYGLVSYWTAYLKANYPAEYMAGLLTSVSDDKDKMAIYLAECRRLGIKILS
PDVNESVVDFTAVGDSVRFGLKAVRNVGVPVIESLVKSRAEKGKYSSFADFLDKVELVVC
NKRTVDSLIKAGAFDSLGHTRQSLVAVCETAIDSVTSLKKQQAIGQDDLFGSMDSSTDDS
PSIGLDFTLDDREWPRKHLLSLEREMLGLYVSSHPLDGAEHILSRNRDTSIAELLGSGRT
EGFVKLCGLITSVDRRINKAGNPWAIITIADRDGSVEVLYFPKAYQLVAHELIEDNVISV
RGRLNERDGAISIFGEEMQPVDISSAEHGGKPPIQLNIPERKINPKLVAELKRTMRAHPG
DVPVRLLMSGHERNVLFELGFLVDPESGFASDIKGLLGPGVWAATA
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacagcttcgttcacctgcatgtacacaccgagtactcgatgctggacggagct
gccaagaacggcaagctgatcgccgaggtcgagcgccagggcatgcccgcggtggccatg
tcggaccacgggaacatgttcggcgcctacgagttcttccagaccgccaagaagaccggc
ggggtcaagccgatcatcggcatcgaggcgtacgtggcgcccgagtcccggttccacaag
aagcaggtgttctgggcccccggcgggcagcgggtggccagcgccgacggcgagggcggc
aaggacgtctccggcggcggccgctacacccacatgaccatgtgggcgcagaacgccgag
ggcctgcggaacctgttcaagctctcctcgctggcgtcgatggagggctactacatgaag
ccccggatggaccgcgagctgatcgccgccaacgccaagggaatcatcgccaccaccggc
tgcccctccggcgaggtgcagacccggctgcgcctcggccagtacgacgaggcggtcaag
gccgccgacgcctaccagcagatcttcggcaaggagaactacttcctggagctgatggac
cacggcctcgacatcgagcgcggcgtccgcgaggacctgctgcggctggcgaaggcgctg
gacatcccgctgctggcgaccaacgactcgcactacgtcaccgaggaccaggccgacgcc
cacgacaacctgctgtgcgtgggcgtgggcaagaacaaggacgacccgaaccggttcaag
ttcaacggctccggctactacatcaagacctccgaggagatgcgcgagctgttccgggag
ctgccggaggcctgcgacaacaccctggcgatcgccgagcggatcgagccctacgacgag
gtgttcacctacgtcgaccggatgccgcagttcgacgtgccggagggggagacccaggcg
tcctggctccggcacaagatcgccgaggggctcccccggcgctacggcgacgccccgagc
caggaggtgctggaccggatcgagctggagatgggcgtcatctccccgatggggttcgac
gcctacttcctcgtggtcgccgacatctgccagtacgcccgcgacaacggcatcccggtc
ggccccggtcgtggctccgcggccggttcgatcgtggcgtacctgacccggatcaccgaa
ctcgacccgctcgaacacgatctgctgttcgagcggttcctcaacccggagcggatcaac
ccgcccgacgtcgacatcgacttcgacgaccgccagcgcgaccagatggtccgctacgtc
accgagaagtacggcgaggcctacaccgcgcaggtcaacaccttcggcacgatcaaggcc
aaggccgcggtcaaggacgccaaccggatcctcggttaccccttctccatgggcgaccgg
atcaccaaggcgatgccgccggacgtgatgggcaagggcgtcccgctgtacgcgctgttc
gacgagtcgcacccgcggtactccgagggcggcgagatccgggcgatgtacgagaacgag
cccgacgtcaagaagatcatcgacaccggcaagggcatcgagggcctgacccggggcacc
ggcgtgcacgccgccgcggtgatcctctcctccgtcccgctgctcgacctgatcccgctg
cacaagcgggacaaggacggggtgatcatcaccggcttctcgtacccgcagtgcgaggac
atgggcctgatcaagatggacttcctgggtctgcggaacctgggcatcatcgaccacgcc
atcaagatcatcaaggccaaccggggcgtcgcggtcgacaccgagaagatcccgctcgac
gacccggtcacctacgacctgctggcgcgcggcgacaccctgggcgtgttccagctggac
ggcgggcccatgcgggcgctgctgaagctgatgaagccgaccgagttcgccgacatctcc
gccgtctcggcgctgtaccggccgggcccgatgggcatgaactcgcacaccaactacgcg
ctccgcaagaacgccatgcaggagatcaccccgatccacccggagttggaggagccgctc
aaggacgtcctcggccccacctacggcctgatcgtctaccaggagcaggtgcagcgcgcg
gcgcaggtgctggccggctacagcctgggacaggccgacctgctccgccgggccatgggc
aagaagaagaaggaggtcctggagcaggagttcgtgcccttccacgcgggctgcaaggag
cgcggctactcggacgaggcgatccaggcggtgtgggacgtgctggtcccgttcgccggg
tacgccttcaacaagtcgcactccgccgcgtacgggctggtctcctactggaccgcctac
ctcaaggccaactacccggccgagtacatggccgggctgctcacgtcggtgtccgacgac
aaggacaagatggcgatctacctcgccgagtgccgccgactgggcatcaagatcctctcc
ccggacgtcaacgagtcggtggtcgacttcaccgccgtcggcgactcggtccgcttcggc
ctgaaggcggtccgcaacgtcggcgtgccggtgatcgaatccctggtcaagtcccgggcc
gagaaggggaagtactcctccttcgcggacttcctggacaaggtcgagctggtggtctgc
aacaagcgcacggtggactcgctgatcaaggccggggccttcgactcgctcgggcacacc
cggcagagcctggtggcggtctgcgagaccgccatcgactcggtcaccagcctgaagaag
cagcaggccatcgggcaggacgacctgttcggctcgatggactccagcaccgacgactcc
ccctcgatcggcctggacttcaccctcgacgaccgcgagtggccgcgcaagcacctgctc
agcctggagcgggagatgctgggcctgtacgtctccagccacccgctggacggcgccgag
cacatcctgtcccgcaaccgcgacacctccatcgcggaactgctcggctccggccggacc
gagggcttcgtcaagctctgcgggctgatcacctcggtggaccggcggatcaacaaggcc
gggaacccctgggcgatcatcaccatcgccgaccgcgacggctcggtggaggtgctgtac
ttccccaaggcgtaccagctggtggcgcacgagctgatcgaggacaacgtgatctcggtc
cgcgggcggctgaacgagcgggacggcgcgatcagcatctttggtgaggagatgcagccg
gtcgacatctcctcggccgagcacggcggcaagcctccgatccagctgaacatcccggag
cgcaagatcaaccccaagctggtggccgagctcaagcgcaccatgcgggcgcacccgggc
gacgtgccggtgcggctgctgatgtccgggcacgagcggaacgtgctgttcgaactgggc
ttcctggtcgatccggagagcggcttcgccagtgacatcaagggcctgctcggccccggg
gtctgggccgcgacggcctga
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