Streptacidiphilus sp. P02-A3a: GXP74_32055
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Entry
GXP74_32055 CDS
T08580
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
strh
Streptacidiphilus sp. P02-A3a
Brite
KEGG Orthology (KO) [BR:
strh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
strh03016
]
GXP74_32055
Enzymes [BR:
strh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
GXP74_32055
Transfer RNA biogenesis [BR:
strh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
GXP74_32055
Prokaryotic type
tRNA splicing ligases
GXP74_32055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
QMU72190
LinkDB
All DBs
Position
complement(7592633..7593826)
Genome browser
AA seq
397 aa
AA seq
DB search
MSYTEVPGVRVPIRMWTDPAAVEGQAMQQLRNISTLPWIAGLAVMPDVHLGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTTLTARDLPDNLSRLRDRIERAIPVGRAAHAEAVDPT
KLHGYPVAGWNDFWSRFDQVAPQVHWRRERAMSQLGSLGSGNHFLEFCLDTAGGVWLMLH
SGSRNIGKELAEHHMDVARSLPHNQGLVDRDLAVFIADTPQMAAYRQDLFWAQEYAKHNR
AVMMALFQNVVRREFTRARVGFEQVISCHHNYVSEEVYGGQELLVTRKGAIRAGSGEFGI
IPGSMGTGSYIVKGLGNEAAFNSASHGAGRKMSRNAAKRRFGVRDLEEQTRGVECRKDSG
VVDEIPGAYKPIEQVMAQQTDLVEVVAQLKQLVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaccgaagtccccggcgtccgggtgcccatccggatgtggaccgatccggcc
gccgtcgagggccaggcgatgcagcagttgcgcaacatctccacgctgccgtggatcgcg
ggcctcgccgtgatgcccgacgtgcacctgggcaagggggccaccgtcggctcggtcatc
gccatgcggggggcggtctgcccggccgccgtcggcgtcgacatcggctgcgggatgagc
gcggtgaagaccacgctcaccgcccgcgacctgccggacaacctctcccggctgcgtgac
cggatcgagcgcgcgatcccggtcggccgggccgcgcacgcggaggcggtcgatccgacc
aagctgcacggctacccggtggcgggctggaacgacttctggtcgcggttcgaccaggtc
gcgccgcaggtgcactggcggcgggagcgggcgatgtcgcaactgggctcgctcggctcg
ggcaaccacttcctggagttctgcctggacacggcgggcggggtctggctgatgctgcac
tccggctcccgcaacatcggcaaggaactcgccgagcaccacatggacgtggcccgctcg
ctgccgcacaaccagggcctggtcgaccgcgacctggcggtcttcatcgcggacaccccg
cagatggccgcctaccggcaggacctgttctgggcgcaggagtacgccaagcacaaccgg
gcggtgatgatggcgctcttccagaacgtggtccgcagggagttcacccgagcccgggtc
ggctttgagcaggtgatcagctgtcaccacaactacgtcagcgaagaggtctacggcgga
caggagttgctggtcacccggaagggcgcgatccgggcgggctccggggagttcgggatc
atcccggggtccatgggtaccggctcctacatcgtcaagggccttggcaacgaggcggcc
ttcaactcggcctcgcacggcgccggacgcaagatgagccgcaacgcggcgaagcggagg
ttcggggtgcgggacctggaggagcagaccaggggtgtggagtgccgcaaggactccggc
gtggtcgacgagatcccgggcgcctacaagccgatcgagcaggtcatggcccagcagacc
gacctggtcgaggtcgtcgcccagttgaagcaactggtctgcgtgaagggctga
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