Streptacidiphilus sp. P02-A3a: GXP74_32180
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Entry
GXP74_32180 CDS
T08580
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
strh
Streptacidiphilus sp. P02-A3a
Pathway
strh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXP74_32180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strh03019
]
GXP74_32180
03400 DNA repair and recombination proteins [BR:
strh03400
]
GXP74_32180
Enzymes [BR:
strh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXP74_32180
Messenger RNA biogenesis [BR:
strh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GXP74_32180
DNA repair and recombination proteins [BR:
strh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GXP74_32180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QMU72211
LinkDB
All DBs
Position
7625723..7627921
Genome browser
AA seq
732 aa
AA seq
DB search
MDPTRSAVIDLADRDAVHARADAVLRELAGGDARLRDDQWRAIEALVVDRRRALVVQRTG
WGKSAVYFVATALLRAAGAGPTVIVSPLLALMRNQIDSAARAGITARTINSANADEWESV
QAEVAAGAVDVLLVSPERLNNPDFRDQVLPRLAASTGLLVVDEAHCISDWGHDFRPDYRR
LRSMLAELAPGVPVLATTATANTRVTADVAEQLGTGGTEALVLRGPLDRESLKLGVLRLG
DPAQRLAWLADRLSELPGSGIVYTLTIAAAEEVTAFLRQRGFAVASYSGRTEDVDRRAAE
ADLLANRVKALVATSALGMGFDKPDLGFVVHLGSPQSPIAYYQQVGRAGRGIKQAEALLL
PGPEDQAIWRYFASLAFPPEEQVRITLAVLGAHTDADGQPLPLSTQALEARVDLRRTRLE
TMLKVLDVDGAVKRVRGGWIATGRPWAYDAARYARVAETRAAEQRSMLEYAATEGCRMEF
LRRQLDDEQAGPCGRCDNCTGEGHSAGASAEALTAARAALGRPGIEIEPRRQWPTALAAA
GVDLKGRIPPTEQAAPGRALGRLSDIGWGTRLRTLLAPDAPDAPVPAEVLDAVVAVLADW
ARGPGGWAGGDADAPARPAGVVTVASRTRPQLVESLGAGIARVGRLPLLGRVEYTSGEPA
RGSRSNGAQRLRGLHGAFAVPEALATALSAAEGPVLLVDDSVDSGWTIAVTARLLRRAGA
RGVLPLVLAQQS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacccgacccgcagcgcagtcatcgacctggccgaccgggacgccgtgcacgcgcgc
gccgacgccgtgctccgcgagctcgccggtggtgacgcccgcctgcgcgacgaccagtgg
cgcgccatcgaggcgctggtggtcgaccgccgccgggcgctggtggtgcagcgcaccggc
tggggcaagtccgccgtgtacttcgtggcgaccgcgctgctgcgggccgccggggccggg
ccgacggtgatcgtctcgccgctgctggcgctgatgcgcaaccagatcgactccgccgcc
cgggccgggatcaccgccaggaccatcaactccgccaacgccgacgagtgggagtcggta
caggccgaggtggccgccggggcggtggacgtgctgctggtcagcccggagcggctgaac
aaccccgacttccgggaccaggtgctgccccggctggccgcctccaccgggctgctggtg
gtcgacgaggcccactgcatctccgactggggccacgacttccggcccgactaccgccgg
ctgcgctccatgctggcggagctggcgcccggcgtcccggtgctggcgaccaccgccacc
gccaacacccgggtcaccgcggacgtcgccgagcagcttggcaccggcggcaccgaggcg
ctggtgctgcgcgggccactggaccgggagagcctgaagctgggcgtgctgcgcctcggc
gacccggcgcagcggctggcctggctggccgaccggctcagcgaactgcccggctccggc
atcgtctacacgctcaccatcgccgccgccgaggaggtcaccgcgttcctgcggcagcgc
ggcttcgcggtggcctcctactcgggccgcaccgaggacgtcgaccgtcgcgccgccgag
gccgacttgctcgccaaccgggtgaaggcgctggtcgcgacgtccgccctgggcatgggc
ttcgacaagcccgatctgggcttcgtggtgcaccttggctcgccgcagtccccgatcgcc
tactaccagcaggtggggcgtgccgggcgcggcatcaagcaggccgaggcgctgctgctg
cccgggcccgaggaccaggccatctggcgctacttcgcctcgctcgccttcccgccggag
gagcaggtgcggatcaccctggccgtgctgggcgcgcacaccgacgccgacggccagccg
ctgccgctgtccacgcaggccctggaggcccgggtggacctgcgccgcaccaggctggag
acgatgctcaaggtgctggacgtggacggcgcggtgaagcgggtgcgcggcggctggatc
gccaccggccgcccctgggcctacgacgccgcccgctacgcgcgggtcgccgagacccgt
gcggccgagcagcgctcgatgctggagtacgccgccaccgaggggtgccggatggagttc
ctgcgccgccagctggacgacgagcaggccgggccctgcggccgctgcgacaactgcacc
ggtgagggccactccgccggtgcctcggccgaggcgctgacggcggcccgggccgccctg
ggccgccccggcatcgagatcgagccccgccgccagtggccgacggccctggccgccgcc
ggggtggacctgaagggccggatcccgccgaccgagcaggcggcgcccgggcgggcgctc
gggcggctgtccgacatcggctggggcacccggctgcggacgctgctggctccggacgcc
ccggacgcgccggtcccggccgaggtgctggacgcggtggtcgcggtgctcgcggactgg
gcgcgcggtcccggcggctgggccggcggcgacgccgacgcccccgcccgtcccgccggg
gtggtgaccgtggcctcgcgcacccggccgcagctggtggagagcctgggcgcggggatc
gcccgggtcggccggctgccgctgctcggccgggtggagtacacctcgggcgagcccgcg
cgcggctcgcgcagcaacggcgcgcagcggctgcgggggctgcacggcgccttcgcggtg
ccggaggcactggccacggcgctgtccgcagcggaggggccggtgctgctggtcgacgac
agcgtggactccggctggacgatcgcggtcaccgccaggctgctgcgccgcgccggggcc
cggggagtactgccgctggtcctggcgcagcagagctga
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