Streptacidiphilus sp. P02-A3a: GXP74_32370
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Entry
GXP74_32370 CDS
T08580
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
strh
Streptacidiphilus sp. P02-A3a
Pathway
strh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXP74_32370 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strh03019
]
GXP74_32370 (rny)
Messenger RNA biogenesis [BR:
strh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GXP74_32370 (rny)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
KH_KhpA-B
KH_2
DUF7669
DUF2518
Sarcolipin
Motif
Other DBs
NCBI-ProteinID:
QMU72244
LinkDB
All DBs
Position
complement(7669969..7671369)
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AA seq
466 aa
AA seq
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MEIALVAGTVVLVAVLLMGWLLLRGARERVAECERREQRGAEREARLDDEQHRLHERTVE
TAESQAALARQREELRAERARVETERRLELERIAGLTAATARAELVRGIEEQAKREAVRS
AREIEARAQAEAETRARMIVATAVQRIAAEQTADAVVSVVRLPADEMKGRIIGREGRNIR
SFEAVTGVNLVIDDTPELVVLSCFDPVRREVGRLTLEALIADGRIHPLRIEEMHERSLVE
VERVCARAGEDALAEVGITDMHPELVRLLGRLRFRTSYGQNVLGHLLESAHIAGMMAAEM
RADVALVRRCTLLHDIGKALTHEVEGSHALIGADLARRYGETEDVVHAIEAHHNEVAPQT
LEAVLTQAADACSGGRPGARRESLELYARRLERLESIARAHEGVHKVFAMQAGREVRVMV
LPDAVDDLQAQVIARDVAKQVEEELTYPGQIRITVIRESRATEFAR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcgctggtcgcgggaacagtcgtcctggtggccgtactcctgatgggctgg
ctgctgctgcgcggcgcgcgggagagggtcgccgagtgcgaacgccgcgagcagcgcggc
gccgagcgcgaggcccggctggacgacgagcagcaccgcctgcacgagcggaccgtcgag
acggcggagagccaggccgcgctggcgcgtcagcgcgaggaactgcgggccgagcgggcc
cgggtggagaccgagcggcggctggagctggagcggatagcggggctgaccgccgccacc
gcccgggccgaactggtgcgcgggatagaggagcaggccaagcgggaggcggtgcgcagc
gcccgggagatcgaggcgcgggcgcaggccgaggccgagacccgggcccggatgatcgtc
gccacggcggtgcagcggatcgcggccgagcagaccgcggacgcggtggtgtcggtggtg
cggctgcccgccgacgagatgaagggccggatcatcggccgcgagggccgcaacatccgc
tccttcgaggcggtcaccggcgtgaacctggtgatcgacgacacgccggaactggtggtg
ctgtcctgcttcgacccggtgcgccgcgaggtgggccggctgacgctggaggcgctgatc
gcggacggccggatccatccgctgcggatcgaggagatgcacgagcgcagcctggtcgag
gtggagcgggtctgcgcgcgggccggggaggacgccctggccgaggtcgggatcaccgac
atgcaccccgaactggtgcggctgctgggccggttgcgcttccgtacctcgtacgggcag
aacgtgctggggcatctgctggagtcggcgcacatcgccgggatgatggcggccgaaatg
cgggccgatgtcgcgctggtgcggcgctgcaccctgctgcacgacatcggcaaggcactc
acgcacgaggtggagggcagccacgcgctgatcggcgcggacctcgcccggcgctacggc
gagaccgaggacgtggtgcacgcgatagaggcgcaccacaacgaggtggcgccgcagacg
ctggaggcggtactgacccaggcggccgacgcctgctccggtggccgaccgggcgcccgc
cgggagtcgttggagctgtacgcgcgccggctggagcggttggagtcgatcgcccgggcg
cacgagggggtgcacaaggtcttcgcgatgcaggccgggcgcgaggtgcgggtgatggtg
ctcccggacgccgtggacgacctccaggcacaggtgatcgcgagggacgtggccaagcag
gtcgaggaggagctgacctacccgggccagatccggatcacggtgatcagggagagccgc
gcgaccgagttcgcccgctga
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