Peterkaempfera bronchialis: C7M71_005990
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Entry
C7M71_005990 CDS
T05561
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stri
Peterkaempfera bronchialis
Pathway
stri03030
DNA replication
stri03430
Mismatch repair
stri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C7M71_005990
03430 Mismatch repair
C7M71_005990
03440 Homologous recombination
C7M71_005990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stri03032
]
C7M71_005990
03400 DNA repair and recombination proteins [BR:
stri03400
]
C7M71_005990
Enzymes [BR:
stri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C7M71_005990
DNA replication proteins [BR:
stri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C7M71_005990
DNA repair and recombination proteins [BR:
stri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C7M71_005990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AXI77065
UniProt:
A0A345STL0
LinkDB
All DBs
Position
complement(1368917..1372450)
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDSFAHLHVHTEYSMLDGAARLKELFKEVERQGMTHVAMTDHGNMYGAAEFHKQATAAG
ITPVIGIEAYVAPESRTNPKRILWGQPHQKRDDVSASGAYLHKTIWARNKQGLHNLFKLT
SRSYAEGWLVKWPRMDKEILAEHAAGLMASTGCPSGELQTRLRLGQYDEALKSAAEYQDI
FGKDHYFLELMDHGLDIEKRVRDGLIEIGKKLGIPPVVTNDSHYTREEDAAAHDLLLCVQ
TGKNLSDPDRFRFDGTGYFIKSAAEMYAVDSSDAWQEGCRNSQLLVAQQVDTAGMFEFKN
LMPRFPIPEGYDSEEAFFRAEVWKGMDRRFPGGYDEEHRKLAEYEMDTICQMGFPAYFLV
VSDFILWAKGQGIAVGPGRGSAAGSLVAFAMGITDLDPIPHGLIFERFLNPERISMPDVD
IDFDERRRGDVIRYVTEKWGSDKVAQIVTYGTIKAKAAIKDASRVLGYPYAMGDRITKAM
PPDVMGKGIPLSGITDSAHPRYSEAGEIRGLYENDPDVRKVIDTARGIEGLIRQPGVHAA
GVIMSAETLTDHIPVWTRHTDGAVITQFDYPTCEGLGLLKMDFLGLRNLTIMDDAVKAIE
KNKGEKIELLQLPLDNKAAYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLAL
YRPGPMGVNSHTNYALRKNGQQEITPIHPELEAPLKEVLEPTYGLIVYQEQVQKAAQILA
GYSLGQADLLRRAMGKKKKEILEAEFVPFQKGCRERGYSDEAIQAVWDVLVPFSGYAFNK
AHTAGYGLVSYWTAYLKANYPAEYMSALLTSVKDDKDKSAVYLNECRKMGIQVLPPDVNE
SDAEFTPHGNDTVRFGLTAVRNVGANVVDSVVRTRKAKGKYTSFPDFLDKVESVVCNKRT
VESLIKAGAFDSLGHTRKGLTAQFEPMIDNVVGVKRKEAEGQFDLFGGDAVEDDGPGFGL
DVVFSEDEWEKSFLLTQEREMLGLYVSSHPLHGIEHVLADKADCAVADLAERPDGSILTI
GGIISGLQRKMTKQGNAWAIATVEDLAGSIDCMFFPASYQLVSTQLVEDAVVFVKGKLDR
REDVPRLMGMELTVPDLSDAHAEAPVVISIPMVKITPPLVARLGEVLTHHKGNTEVRLRL
EGHRKTTVLRLDRHRVTSDPALFGDLKQLLGPSCLAG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgattccttcgcgcatctgcatgtccacaccgagtactcgatgctggacggcgcc
gcccgcctgaaggagctgttcaaggaggtcgaacggcagggcatgacccatgtcgcgatg
accgaccacggcaatatgtacggcgccgccgagttccacaagcaggccaccgccgccggc
atcaccccggtcatcggcatcgaggcgtatgtcgcgcccgagtcgcgcaccaaccccaag
cgcatcctgtggggccagccgcaccagaagcgcgacgacgtctccgcgtccggcgcctac
ctccacaagaccatctgggcccgcaacaagcagggcctgcacaacctcttcaagctgacc
tcgcgctcctacgccgagggctggctggtcaagtggccccggatggacaaggagatcctg
gccgagcacgcggccggcctgatggcctccaccggctgcccctccggcgagctccagacc
cggctgcgcctcggccagtacgacgaggcgctgaagtcggccgccgagtaccaggacatc
ttcgggaaggaccactacttcctggagctgatggaccacggcctggacatcgagaagcgg
gtccgcgacggcctgatcgagatcgggaagaagctgggcatcccgccggtcgtcaccaat
gactcccactacacccgggaggaggacgccgccgcgcacgacctgctgctctgcgtgcag
accggcaagaacctctccgacccggaccgcttccggttcgacggcaccggctacttcatc
aagtccgccgccgagatgtacgccgtcgactcctccgacgcctggcaggaggggtgccgc
aacagccagctgctggtcgcccagcaggtcgacaccgccgggatgttcgagttcaagaac
ctgatgccgaggttccccatcccggaggggtacgacagcgaggaggcgttcttccgcgcc
gaggtgtggaagggcatggaccgccgcttccccggcggctacgacgaggagcaccgcaag
ctcgccgagtacgagatggacaccatctgccagatgggcttccccgcgtacttcctggtg
gtctccgacttcatcctctgggccaagggccagggcatcgcggtcggccccggccgaggc
tcggcggcgggctcgctggtcgcgttcgccatgggcatcaccgacctcgaccccatcccg
cacggcctgatcttcgagcgcttcctcaaccccgagcgcatctcgatgcccgacgtcgac
atcgacttcgacgagcgccggcgcggcgacgtgatccgctatgtcaccgagaagtggggc
tccgacaaggtcgcccagatcgtcacctacggcaccatcaaggccaaggccgccatcaag
gacgcctcccgggtgctcggctacccgtacgccatgggcgaccgcatcaccaaggccatg
ccgccggacgtgatgggcaagggcatcccgctctccggcatcaccgactccgcgcacccc
cgctacagcgaggccggcgagatccggggcctgtacgagaacgacccggacgtgcgcaag
gtcatcgacaccgcgcgcggcatcgagggcctgatccgccagcccggcgtgcacgcggcc
ggcgtcatcatgtccgccgagacgctcaccgaccacatcccggtgtggaccaggcacacc
gacggcgccgtcatcacccagttcgactaccccacctgcgaggggctcggactgctgaag
atggacttcctcggcctgcgcaacctcaccatcatggacgacgccgtcaaggcgatcgag
aagaacaagggcgagaagatcgagctgctccagctcccgctggacaacaaggcagcctat
gaactgctcgcccgaggcgacaccctcggcgtcttccagctcgacggcgggccgatgcgg
tccctgctgcggctgatgaagcccgacaacttcgaggacatctccgccgtcctggcgctc
taccgccccggcccgatgggcgtcaactcgcacaccaactacgcgctccgcaagaacggg
cagcaggagatcaccccgatccaccccgagctggaggcgccgctcaaggaggtgctggag
cccacctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcctggcc
ggctactcgctcggacaggccgacctgctgcgccgggcgatgggcaagaaaaagaaggag
atcctggaggcggagttcgtccccttccagaagggctgccgcgagcgcggctactccgac
gaggccatccaggccgtctgggacgtgctggtccccttctccggctacgccttcaacaaa
gcgcacaccgccggctacggcctggtctcctactggaccgcctacctcaaggccaactac
ccggccgagtacatgtcggcgctgctcacctcggtcaaggacgacaaggacaagtcggcg
gtctacctcaacgagtgccgcaagatgggcatccaggtgctgccgccggacgtcaatgag
tccgacgccgagttcaccccgcacggcaatgacaccgtccggttcggcctcaccgccgtc
cgcaacgtcggcgccaacgtggtggactccgtcgtccgcacccgcaaggccaagggcaag
tacacctccttccccgacttcctggacaaggtcgagtcggtggtctgcaacaagcgcacc
gtcgaatccctgatcaaggccggcgccttcgactccctgggccacacccgcaagggcctc
accgcccagttcgagccgatgatcgacaatgtggtcggggtcaagcgcaaggaggccgag
ggccagttcgacctcttcggcggtgacgcggtggaggacgacgggcccggcttcggcctg
gacgtggtcttctccgaggacgagtgggagaagtccttcctgctcacccaggagcgggag
atgctcggcctctatgtctcctcgcacccgctgcacggcatcgagcacgtcctcgccgac
aaggccgactgcgccgtcgcggacctggccgagcggcccgacgggtccatcctcaccatc
ggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcctgggccatc
gccaccgtcgaggacctggccggctccatcgactgcatgttcttccccgccagctaccag
ctggtctccacccagctggtcgaggacgcggtggtcttcgtcaagggcaagctcgaccgg
cgcgaggacgtcccccggctgatgggcatggagctgaccgtccccgacctctccgacgcc
catgccgaggcccccgtggtgatctccatccccatggtgaagatcaccccgccgctggtc
gcccggctcggcgaggtgctcacccaccacaagggcaacaccgaggtccggctgcgtctg
gagggccaccgcaagaccaccgtgctccggctcgaccggcaccgggtcacctccgacccg
gcgctcttcggcgacctcaagcagttgctcggcccctcctgcctggccggctga
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