Peterkaempfera bronchialis: C7M71_008910
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Entry
C7M71_008910 CDS
T05561
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
stri
Peterkaempfera bronchialis
Pathway
stri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7M71_008910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stri03019
]
C7M71_008910
03009 Ribosome biogenesis [BR:
stri03009
]
C7M71_008910
Enzymes [BR:
stri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
C7M71_008910
Messenger RNA biogenesis [BR:
stri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C7M71_008910
Ribosome biogenesis [BR:
stri03009
]
Prokaryotic type
rRNA processing factors
C7M71_008910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
AXI77544
UniProt:
A0A345SUY9
LinkDB
All DBs
Position
complement(2028980..2032288)
Genome browser
AA seq
1102 aa
AA seq
DB search
MLEINEPQGAAPDGTADGTASAASAEAAVNREAAHEESAAAPPRRRRRAVSRPAGPPQGA
EATAEAPAQPEAAAPAVEQAEQAVEAVEKPKRVRRTRKKAEVAPEPVAAEPEAPAEPEAA
APVAEQAEQAVEAVEKPKRVRRTRKKAEVAPEPVAAEPEAPAPVAEEPAAEEPEEEQAAE
AETAAEPQPEPEPGHRTRRRVVRPPTAIFQPPVFQEPAAPIAPPRDRDHDEEEAEEADQS
GRRRRRRRASAPAGPAVSEEAVAELQAEPEAAEDEAAHEEEAETHDAEHGEDDGRPSRRR
RRGGRRRRRGDAEDRADEDHDEHQDDSAEESAQEQDEDDDEDDLAAGLASSRRRRRRRRR
SGDTGPDLDAAGTDDPERTVVKVREPRKKASHEPAFDPDEVQSIKGSTRLEAKKQRRREG
RELGRRRVPIITEAEFLARRESVERVMVVRQSGERTQIGVLEDGVLVEHYVNKEQATSYV
GNVYLGKVQNVLPSMEAAFVDIGKGRNAVLYAGEVNFESLGGHGGPRRIESVLKSGQPVL
VQVTKDPIGHKGARLTSQVSLPGRYLVYVPEGSMTGISRKLPDTERTRLKQILKKIVPDD
AGVIVRTAAEGASEEELTRDVQRLQSQWEDIQKRASGGNAPTLLYGEPDMTVRVVRDIFN
EDFKKVIVQGDDAWSTIHEYVSHVAPDLADRLQRWTSDVDVFATYRIDEQLMKALDRKVW
LPSGGSLVIDRTEAMVVVDVNTGKFTGQGGNLEETVTRNNLEAAEEIVRQLRLRDLGGII
VIDFIDMVLESNRDLVLRRLLECLGRDRTKHQVAEVTSLGLVQMTRKRVGQGLLESFSEQ
CVHCNGRGVIVHMDQPSTSGGGGGTSGGAAKRRRRGKGGAGAGDEQHVHELEHVQEPEEP
EEAAEPVAPEPLEAPAAPEPEPAVAQAPEPAPEQAPAEPQPVSLVELPPAPAPGGRTRRR
AVRKATAPAGPPVEAEAAVLVLPARTPDGEAAQAAVAPAPVAAPEPVVPEPAISEPVVSE
PVVSEPVAADGAVAAPVADGEPEVEAPRKRAARKTAAKKTTAAKKTTAAKKTTTRKTATK
RTTAAKKTAASAEGEPSAPVAE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagatcaacgagccgcagggtgcggcgccggacggcactgccgacggcaccgca
tcggcggcctctgcggaggccgctgtgaaccgtgaagccgcgcacgaggagtcggccgcc
gcgccgccgcgccgccgccggcgtgccgtgtcgcgcccggccggacctccgcagggagcc
gaggccacggccgaggccccggcccagccggaggctgccgccccggccgtggagcaggcg
gagcaggccgtggaggccgtggagaagcccaagcgcgtgcgtcgtacgcggaagaaggcc
gaggtggcgccggagccggtcgccgccgagccggaggcccccgccgagccggaggctgcc
gccccggtcgcggagcaggcggagcaggccgtggaggccgtggagaagcccaagcgcgtg
cgccgtacgcggaagaaggcggaggtggcgccggagccggtcgccgccgagccggaggcc
cccgccccggtcgccgaggagcccgccgccgaggagccggaggaggagcaggccgccgag
gccgagaccgccgccgagccgcagcccgagcccgagccggggcaccggacccgccgccgg
gtggtgcgcccgcccaccgcgatcttccagcccccggtcttccaggagcccgcagccccg
atcgcgccgccgcgcgaccgcgaccatgacgaggaggaggccgaggaggccgaccagagc
ggccgccgccgccgtcgccgccgtgcctcagctccggccggcccggccgtgtcggaggag
gccgtcgccgagctgcaggccgagccggaggccgccgaggacgaggccgcccacgaggag
gaggccgagacccacgacgccgagcacggcgaggacgacggccgtccgtcgcgccgccgc
cggcgtggtggccgccgccgccgtcgcggggacgccgaggaccgcgccgacgaggaccac
gacgagcaccaggacgactccgccgaggagtcggcccaggagcaggacgaggacgacgac
gaggacgatctggccgccggcctggcctcctcccgccgccgtcgccgccgtcgccgccgc
agcggggacaccggcccggacctggacgccgcgggcaccgacgaccccgagcgcaccgtg
gtcaaggtccgcgagccgcgcaagaaggcgtcgcacgagcccgccttcgacccggacgag
gtgcagtccatcaagggctccacccgcctggaggccaagaagcagcgccgccgcgagggc
cgtgagctgggccgccgccgggtgccgatcatcaccgaggccgagttcctggcccgccgc
gagtcggtggagcgcgtgatggtggtccggcagagcggcgagcgcacccagatcggcgtc
ctggaggacggcgtcctggtcgagcactacgtcaacaaggagcaggccaccagctacgtc
ggcaacgtctacctgggcaaggtccagaatgtgctgccgtcgatggaggccgccttcgtc
gacatcggcaagggccgcaacgcggtcctctacgccggcgaggtcaacttcgagagcctg
ggcggccatggcggcccgcgccgcatcgagtcggtgctcaagtccggccagccggtgctg
gtgcaggtcaccaaggacccgatcggccacaagggcgcccgcctgaccagccaggtctcg
ctgcccggccgctacctggtgtacgtgcccgagggctcgatgaccggcatcagccgcaag
ctgcccgacaccgagcgcacccggctgaagcagatcctcaagaagatcgtccccgacgac
gcgggcgtgatcgtgcgcaccgccgctgagggcgccagcgaggaggagctgacccgggac
gtccagcggctccagtcgcagtgggaggacatccagaagcgggcctccggcggcaacgcc
ccgacgctgctctacggcgagccggacatgaccgtccgggtggtccgcgacatcttcaac
gaggacttcaagaaggtcatcgtccagggcgacgacgcctggtcgaccatccacgagtac
gtcagccatgtcgcccccgacctcgccgaccggctccagcggtggacctcggacgtcgac
gtcttcgcgacgtaccggatcgacgagcagctgatgaaggcgctggaccgcaaggtctgg
ctgcccagcggcggttcgctggtcatcgaccgcaccgaggcgatggtcgtggtcgacgtc
aacaccgggaagttcaccggccagggcggcaacctggaggagacggtcaccaggaacaac
ctggaggcggccgaggagatcgtccgccagctgcggctgcgcgacctcggcggcatcatc
gtgatcgacttcatcgacatggtgctggagtccaaccgcgacctggtgctgcggcgcctg
ctggagtgcctgggccgcgaccgcaccaagcaccaggtggccgaggtcacctcgctgggc
ctggtgcagatgacccgcaagcgggtgggccagggcctgctggagtccttctccgagcag
tgcgtgcactgcaatggccgtggcgtcatcgtgcacatggaccagccgtccacctccggc
ggtggcggcggcacctcgggtggcgccgccaagcgccgccgccggggcaagggcggcgcg
ggcgcgggcgacgagcagcacgtccacgagcttgagcatgtgcaggagccggaggagccc
gaggaggccgccgagccggtcgccccggagcccttggaggccccggccgcgcccgagccc
gagcccgccgtggcgcaggccccggagccggcacccgagcaggccccggcggagccgcag
ccggtcagcctggtggagctgcccccggccccggcgccgggcggccgtacccgccgccgc
gcggtccgcaaggccaccgctccggccggtccgccggtggaggcggaggccgcggtgctg
gtgctgccggcccgtacgccggacggcgaggcggcgcaggcagccgtggctccggccccg
gtggctgcccccgagccggtcgtccccgagccggcgatctccgagccggtggtctccgag
ccggtggtctccgagccggtcgccgccgacggtgccgtggcggccccggtggcggacggc
gagcccgaggtggaggcgccccgcaagcgcgccgcccgcaagacggccgccaagaagacc
acggcggccaagaagaccaccgcggcgaagaagaccaccacccgcaagaccgccaccaag
cggaccaccgcggccaagaagacggccgcgtcggcggagggcgagccctccgccccggtg
gccgagtag
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