Peterkaempfera bronchialis: C7M71_010800
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Entry
C7M71_010800 CDS
T05561
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stri
Peterkaempfera bronchialis
Brite
KEGG Orthology (KO) [BR:
stri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stri03021
]
C7M71_010800
Transcription machinery [BR:
stri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C7M71_010800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
DUF7343
HTH_3
MarR_2
HTH_Crp_2
Sigma70_ECF
HTH_24
MarR
GerE
NirdL-like_HTH
DUF1492
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AXI77852
UniProt:
A0A345SVU7
LinkDB
All DBs
Position
2482100..2483029
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AA seq
309 aa
AA seq
DB search
MAAQLDATRQIDASSETARTAVLERLEATAEVLEAPGRRPASLEDLPEIPPTDQVGPLDA
RALSKVLFRRLETLEEGTAEHAYVRNTLIELNLALVKFAASRFRSRSEPMEDIVQVGTIG
LIKAIDRFEMDRGVEFPTFAMPTIIGEIKRFFRDTSWAVRVPRRLQELRLDLAKATDELA
QQLDRAPTVAELARKLDIPEDEVIEGMAVSNAYTASSLDAQPEEDETEGALADRIGYEDH
GMEGIEYRESLKPLIAELPERDRKILSLRFVGNMTQSEIGAELGISQMHVSRLLSRTLTR
LRAGLLVEE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccagctcgacgccacgcggcagatcgacgcgtcgtcggagacggcgcgtacc
gcagtcctggagcggctggaggcgaccgctgaggtcctggaagcgccgggccgccgcccg
gcatcgctggaggacctaccggagatcccgcccacggaccaggtcggcccgctggatgcc
cgagcgctctccaaggtcctcttccgccggctggagaccctggaggagggcacggcggag
cacgcctatgtgcggaacaccctcattgagctcaacctggcgctggtgaagttcgcggcc
tcccggttccgctcccgcagcgagccgatggaggacatcgtccaggtcggcacgatcggc
ctgatcaaggcgatcgaccggttcgagatggaccggggcgtggagttcccgaccttcgcg
atgcccaccatcatcggcgagatcaagcggttcttccgcgacaccagctgggcggtgcgg
gtgccgcgccgcctccaggagctgcggctggacctcgccaaggccaccgacgagctggcc
cagcagctggaccgcgcccccaccgtcgccgagctggcccgcaagctggacatccccgag
gacgaggtcatcgagggcatggcggtgagcaacgcctacaccgccagctcgctggacgcc
cagcccgaggaggacgagaccgagggcgcgctggccgaccggatcggctacgaggaccac
ggcatggagggcatcgagtaccgggagtccctcaagccgctgatcgccgagctgccggag
cgcgaccggaagatcctctcgctgcgcttcgtcggcaatatgacccagtcggagatcggc
gccgagctgggcatatcccagatgcatgtctcgcggctgctgtcccggacgctgacccgg
ctgcgggccgggctgctcgtggaggagtga
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