Peterkaempfera bronchialis: C7M71_016255
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Entry
C7M71_016255 CDS
T05561
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stri
Peterkaempfera bronchialis
Brite
KEGG Orthology (KO) [BR:
stri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stri03021
]
C7M71_016255
Transcription machinery [BR:
stri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C7M71_016255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
MarR_2
Sigma70_ECF
IMP2_C
MarR
HTH_31
DUF7343
KORA
Motif
Other DBs
NCBI-ProteinID:
AXI78745
UniProt:
A0A345SYE0
LinkDB
All DBs
Position
complement(3662801..3663634)
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AA seq
277 aa
AA seq
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MSVDLRSAEIHGTAAVEAVPVVGESLDTRTLSRSLFLRLAELPPGCPESLYVRDTLIELN
LPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDPERGVEFPTFAMPTVVGEIKRFF
RDTSWSVRVPRRLQELRLALTRAGDELAQKLDRSPTVAELAQCLGVSEEEVVEGLAVGNA
YTASSLDSTPTEEDGDGPLAERLGYEDVALEGVEYRESLKPLLARLPARERRIIMLRFFA
NMTQSQIGEEIGISQMHVSRLLTRTLAQLREGLTSEE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgatctgcgcagcgctgagatccacggcacggctgccgtcgaggcggtcccc
gtcgtcggggagagcctcgacacccgtacgctgtcgcgctcgctcttcctgcggctcgcc
gagctcccgcccggctgcccggagagcctctatgtgcgggacaccctgatcgagctcaac
ctgccgctggtgcggtacgcggctgcccgcttccgcagccgcaatgagccgatggaggac
atcgttcaggtcggcaccatcggcctgatcaaggcgatcgaccgcttcgacccggagcgg
ggggtggagttccccaccttcgcgatgccgaccgtggtcggtgagatcaagcgcttcttc
cgggacaccagttggtcggtgcgggtgccgcgccgcctccaggagctgcggctggccctc
acccgggccggcgacgagctggcgcagaagctggaccgctcgcccaccgtcgccgagctg
gcccagtgcctgggcgtcagcgaggaggaggtggtggagggcctcgcggtgggcaacgcc
tacaccgcctcctcactggactccaccccgaccgaggaggacggcgacggcccgctcgcc
gagcggctggggtacgaggacgtggcgctggagggcgtggagtaccgggagtcgctcaag
ccgctgctggcccggctgcccgcccgcgagcggcggatcatcatgctgcgcttcttcgcc
aatatgacccagtcccagatcggcgaggagatcggcatctcgcagatgcatgtctcccgg
ctgctcaccaggacgctggcgcagctgcgggagggtctgacctcggaggagtag
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