Peterkaempfera bronchialis: C7M71_020680
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Entry
C7M71_020680 CDS
T05561
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
stri
Peterkaempfera bronchialis
Pathway
stri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7M71_020680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stri03021
]
C7M71_020680
03019 Messenger RNA biogenesis [BR:
stri03019
]
C7M71_020680
Transcription machinery [BR:
stri03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C7M71_020680
Messenger RNA biogenesis [BR:
stri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C7M71_020680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA
NACHT
ResIII
Spore_III_AA
SAP
Motif
Other DBs
NCBI-ProteinID:
AXI79465
UniProt:
A0A345T0G0
LinkDB
All DBs
Position
4621806..4624055
Genome browser
AA seq
749 aa
AA seq
DB search
MSDTTDLMGARPDADAPDAAAAAPAPKRRRNTGSGLNGLVLAELQQLASGLGISGTGRMR
KSQLIDAIKEKNGGDPLLAGGEAPAAPAAKRTTKAKAAAAKDEEGAAAEEKPVRRTRARA
AAAEPAPQIEIPGQVAGDNAAAETAPPARAERPRRRATSAAGTPAAGTASAAAEPVQEAV
AERAEPTAALATETREKAAEDARQVGDGRRERRDRRDRTDRGDRVERTDRGDRADRQEAG
DGQGGVDGGQGGDRETRRDRRNRRDRDRDRQGGDRQLGDRQESRQETRQDGGQGRDQGRD
QGRDQARDQGRDQARDQQGGQGRDQRRDQQQQDEDDFDGGRRGRRGRYRDRNRRGGRREG
FEGTSEPQIGEDDVLIPVAGILDILDNYAFVRTSGYLPGPNDVYVSLAQVRKNGLRKGDA
ITGAVRQPREGERREKFNALVRLDSVNGMDPEAGRNRPEFGKLTPLYPQERLRLETDPSV
LTTRIIDLVAPIGKGQRGLIVAPPKTGKTMIMQAIANAITHNNPECHLMVVLVDERPEEV
TDMQRSVKGEVISSTFDRPAEDHTVVAELAIERAKRLVELGHDVVILLDSITRLGRAYNL
AAPASGRILSGGVDSTALYPPKKFFGAARNIENGGSLTILATALVETGSRADEVVFEEFK
GTGNMELRLDRKLSDKRIFPAVDVDASSTRKEEILLGSEELAIVWKLRRVLHALDQQQAI
ELLLDRMKKTSSNGEFLMQIAKTTPGNMD
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgcgcgcccggacgccgatgctccggacgcagcg
gctgcggcccccgcgcccaagcgtcgccggaacacgggctccggcctcaacggcctggtt
ctcgccgagcttcagcagctcgcctccggtcttggtatcagtggcaccgggcgcatgcgc
aagagccagctgatcgacgccatcaaggagaagaacggcggcgacccgctgctggccggc
ggtgaggccccggccgccccggccgccaagcggaccaccaaggccaaggccgctgcggcc
aaggacgaggagggcgctgccgccgaggagaagccggtccggcgcacccgggcccgcgcc
gccgcggccgagcccgcgccgcagatcgagatccccggccaggtggcgggcgacaacgcc
gccgccgagaccgcgccgccggcccgcgccgagcggccgcgccgccgggcgacgtcggct
gcgggcaccccggcggccggtaccgcctcggctgctgccgagcccgtgcaggaggccgtc
gccgagcgcgccgagccgaccgccgcgctggccaccgagacccgtgagaaggccgccgag
gacgcccgccaggtcggcgacggccgccgtgagcgccgggaccgccgcgaccgtaccgac
cgtggtgaccgggtcgagcgcaccgaccgtggcgaccgggccgaccgccaggaggccggc
gacggccagggcggtgtcgacggcggccagggcggcgaccgcgagacccgccgcgaccgg
cgcaaccgccgcgaccgggaccgtgaccgccagggcggcgaccgccagctgggcgaccgc
caggagagccgtcaggagacccgccaggacggcggccagggccgcgaccagggtcgtgac
cagggtcgtgaccaggcccgcgaccagggccgtgaccaggcccgcgaccaacagggcggc
caaggccgcgaccagcgccgcgaccagcagcagcaggacgaggacgacttcgacggtggc
cgccgcggtcgccgtggccgctaccgcgaccgcaaccgccggggtggccgccgcgagggc
ttcgagggcaccagcgagccgcagatcggcgaggacgacgtcctgatcccggtcgccggc
atcctggacatcctggacaactacgcgtttgtgcggacctccggctacctgcccggcccc
aacgacgtgtatgtctcgctggcccaggtccgcaagaacggcctgcgcaagggtgacgcg
atcaccggtgcggtgcgccagccgcgcgagggcgagcgccgcgagaagttcaatgcgctg
gtgcgcctggactcggtgaacggcatggacccggaggccggccgcaaccgccccgagttc
ggcaagctcaccccgctgtacccgcaggagcggctccgcctggagaccgacccgagcgtg
ctgaccacccggatcatcgacctggtcgccccgatcggcaagggccagcgcggtctgatc
gtcgccccgccgaagaccggcaagacgatgatcatgcaggccatcgccaatgcgatcacc
cataacaaccccgagtgccacctgatggtcgtcctggtcgacgagcgtccggaagaggtc
accgacatgcagcggtcggtcaagggcgaggtcatctcctcgaccttcgaccgaccggcc
gaggaccacacggtcgtcgccgagctggccatcgagcgcgccaagcgcctggtggagctg
ggccatgacgtggtcatcctgctggactcgatcacccgtctgggccgtgcctacaacctg
gcggcgccggcctccggccgcatcctgtccggtggtgtcgactcgaccgcgctctacccg
ccgaagaagttcttcggtgccgcgcgcaacatcgagaacggcggctcgctgaccatcctc
gccaccgccctggtggagaccggctcccgggccgacgaggtggtcttcgaggagttcaag
ggcaccggcaacatggagctcaggctcgaccgcaagctctccgacaagcggatcttcccg
gcggtggacgtggacgcctcgtccacccgcaaggaggagatcctgctgggcagcgaggag
ctggccatcgtctggaagctgcgccgggtgctgcacgcgctggaccagcagcaggccatc
gagctgctgctggaccggatgaagaagaccagcagcaacggcgagttcctgatgcagatc
gccaagacgacgccgggcaacatggactga
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