Peterkaempfera bronchialis: C7M71_022205
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Entry
C7M71_022205 CDS
T05561
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
stri
Peterkaempfera bronchialis
Brite
KEGG Orthology (KO) [BR:
stri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stri03009
]
C7M71_022205 (rimO)
Enzymes [BR:
stri01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C7M71_022205 (rimO)
Ribosome biogenesis [BR:
stri03009
]
Prokaryotic type
ribosomal protein modification factors
C7M71_022205 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AXI79709
UniProt:
A0A345T154
LinkDB
All DBs
Position
4996161..4997702
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AA seq
513 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVQDAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADAVLGFDDYADIADRLQTIL
SGGQHTSHAPRDRRKLLPLTPVERQTAAAEVAVPGHGTATGSDRPEAGPEASVDLADLPA
GVAPASGPRTLRRRLDDSPVASVKLASGCDRRCSFCAIPAFRGSFLSRRPADVLSETRWL
AEQGVREVMLVSENNTSYGKDLGDIRLLETLLPELAAVDGIERVRVSYLQPAEMRPGLID
VMTGTPGVVPYFDLSFQHSAPAVLRRMRRFGDTDRFLELLETIRGKAPEAGARSNFIVGF
PGETEADLAELERFLTHARLDAIGVFGYSDEDGTEAAGYDGKLPDDEVAERLARLTRLAE
EMTAQRAEERIGSEVEVLVESLEDGVVEGRAAHQAPETDGLTTLLGAVDAKPGQFVRARV
VATEGVDLVAEPVEGRQPVEGRQPVEGRQGAEA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacgccgcactgtcgcccttgtcacgctcggatgcgcccgcaacgaggtcgat
tccgaggaactcgccgggcggctggaggccgacggctggcagctcgtccaggacgccgcc
gacgccgacgtcgccgtcgtcaacacctgcggctttgtcgaggccgccaagaaggactcc
gtggacgccctgctggaggccaacgacctcaagggccacggccgcacccaggccgtcgtc
gcggtcggctgcatggccgagcgctacggcaaggagctcgccgaggcgctgcccgaggcc
gacgccgtgctcggtttcgacgactacgccgacatcgccgaccgcctccagaccatcctc
tccggcgggcagcacacctcgcacgccccccgcgaccgccgcaagctgctgccgctgacc
ccggtcgagcgccagaccgccgccgccgaggtcgccgtaccggggcatgggaccgccacc
gggtccgaccgcccggaggcgggtccggaggcgagcgtggacctggccgacctgccggcc
ggggtggctccggcgtccgggccgcgcacgctgcggcggcggctggacgactccccggtg
gcctcggtgaagctcgcctccggctgcgaccgccgctgctccttctgcgccatcccggcc
ttccggggctccttcctctcccgccgccccgccgatgtgctctccgagacccgctggctc
gccgagcagggcgtccgcgaggtcatgctggtcagcgagaacaacacctcgtacggcaag
gacctcggcgacatccggctgctggagaccctgctgcccgagctggccgccgtggacggc
atcgagcgggtacgggtcagctacctccagcccgccgagatgcggcccggcctgatcgac
gtgatgaccggcaccccgggcgtggtgccctacttcgacctctccttccagcactccgcg
cccgccgtgctgcgccggatgcgccggttcggcgacaccgaccgcttcctggaactgctg
gagaccatccggggcaaggcgcccgaggccggcgcccggtccaacttcatcgtcggcttc
cccggcgagaccgaggccgacctggcggagctggagcgcttcctcacccacgcccggctg
gacgccatcggcgtcttcgggtactccgacgaggacggcaccgaggcggcgggctacgac
ggcaagctgcccgacgacgaggtggccgagcggctggcgcggctgacccggctggccgag
gagatgaccgcgcagcgggccgaggagcggatcggcagcgaggtcgaggtgctggtggag
tccctggaggacggcgtggtggagggccgggcggcccaccaggccccggagacggacggc
ctgaccacgctgctcggcgcggtggacgccaagcccggacagttcgtccgcgcccgggtg
gtcgccaccgagggcgtcgacctggtggccgagccggtcgaaggccgtcagccagtcgaa
ggccgtcagccggtcgaaggccgtcagggggcggaggcgtga
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