Peterkaempfera bronchialis: C7M71_022455
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Entry
C7M71_022455 CDS
T05561
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stri
Peterkaempfera bronchialis
Pathway
stri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7M71_022455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stri03019
]
C7M71_022455
03400 DNA repair and recombination proteins [BR:
stri03400
]
C7M71_022455
Enzymes [BR:
stri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7M71_022455
Messenger RNA biogenesis [BR:
stri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7M71_022455
DNA repair and recombination proteins [BR:
stri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7M71_022455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
Dimerisation
CinA
Motif
Other DBs
NCBI-ProteinID:
AXI79751
UniProt:
A0A345T196
LinkDB
All DBs
Position
complement(5061144..5063426)
Genome browser
AA seq
760 aa
AA seq
DB search
MDQHQPTPSPATAADRTSADRTSADRAAGLAPGLAAGPAVDRAAVRERADEVLRLLAGDR
ARLREDQWRAIEALVVDHRRALVVQRTGWGKSAVYFVATALLRERGAGPTVIVSPLLALM
RNQIDSAARAGIRARTINSANIDEWDAVQAEVAAGEVDVLLVSPERLNNPDFRDQVLPKL
AASTGLLVVDEAHCISDWGHDFRPDYRRLRTMLAELAPGVPVLATTATANARVTNDVAEQ
LGTGTGDDGEGGGALVLRGPLERESLTLGVLRLPDPAHRLAWLAEHLDELPGSGIVYTLT
VAAAEEVTAFLRQRGHTVASYSGRTEDAERRAAEADLLANRVKALVATSALGMGFDKPDL
GFVVHLGSPNSPIAYYQQVGRAGRGVDRAEALLLPGREDEAIWRYFASLAFPAEEQVRRT
LDVLAEADRPLSTAALEARVDLRRTRLETMLKVLDVDGAVRRVRGGWTATGRSWTYDAER
YARVAEARESEQRAMREYAATDGCRMEFLRRRLDDDQAWPCGRCDTCAGAGHSAEVSPEA
LEAARAALGRPGVEVEPRRMWPTGMEAAGIALKGRIAPGEQAATGRALGRLSDIGWGTRL
RAMLAPGAPDGAVSGEVVDAMVTVLADWARGPGGWAAPGGGGSDRPVGVVTIASATRPAL
VDSLGARIAAIGRLPLLGRVEYGPGGPPRGARSNSAQRLRALHDAFTVPPELAAALASCG
GPVLLVDDLVDTGWTVTVVSRLLRRAGAPGVLPLVLAVQA
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcaccagccgaccccctcccccgccaccgccgccgaccggacgagcgccgac
cggacgagcgccgaccgggcagccggcctggcacctggcctggcagccggcccggccgtc
gaccgggcagccgtccgtgagcgcgccgacgaggtgctgcggctgctcgccggcgatcgg
gcgcggctgcgcgaggaccagtggcgggccatcgaggccctggtggtcgaccaccggcgg
gccctggtggtgcagcgcaccggctggggcaagtcggcggtgtacttcgtggcgaccgcc
ctgctgcgcgagcgcggcgccggaccgacggtgatcgtctcaccgctgctcgccctgatg
cgcaatcagatcgactccgccgcccgggcgggcatccgcgcccgcaccatcaactccgcc
aacatcgacgagtgggacgcggtgcaggccgaggtcgcggccggcgaggtggacgtcctg
ctggtcagccccgagcggctgaacaaccccgacttccgcgaccaggtgctgcccaagctg
gccgcctccaccggcctgctggtggtggacgaggcgcactgcatctccgactggggccat
gacttccgccccgactaccgccggctgcgcaccatgctggccgagctggcgccgggcgtg
ccggtgctggccaccacggccacggccaacgcccgggtgaccaatgacgtggcggagcag
ctgggcaccggtaccggggacgacggggagggcggcggcgcactggtgctgcgcggcccg
ctggagcgggagagcctcaccctgggcgtgctccgactgcccgacccggcgcaccggctg
gcctggctggcggagcacctggacgagctgcccggctccgggatcgtctacaccctcacg
gtggccgcagccgaggaggtcaccgcctttctgcggcagcgcggtcacacggtggcctcc
tactccggccgtaccgaggacgccgagcgccgcgcggccgaggccgacctgctcgccaac
cgggtcaaggcgctggtcgccacctccgcgctgggcatggggttcgacaagcccgacctc
ggctttgtggtgcacctgggctcgcccaactcgccgatcgcctactaccagcaggtcggg
cgggccgggcgcggcgtggaccgcgccgaggcgctgctgctgcccggccgggaggacgag
gccatctggcgctacttcgcctcgctggccttccccgccgaggagcaggtccggcggacc
ctggatgtcctggccgaggccgaccggccgctctccaccgccgcgctggaggcccgggtc
gacctgcgccgcacccggctggagaccatgctcaaggtgctggacgtggacggcgcggtg
cgccgggtgcgcggcggctggacggcgaccggccggagctggacctatgacgccgagcgg
tacgcccgggtcgcggaggcccgggagagcgagcagcgggcgatgcgcgagtacgcggcg
accgacggctgccggatggagttcctgcgccggcggctcgatgacgaccaggcctggccg
tgcggccgctgcgacacctgtgccggggccgggcacagcgccgaggtctcaccggaggcc
ctggaggcggcccgggcggcgctcggccgacccggggtggaggtcgagccccgccggatg
tggcccaccgggatggaggcggccggaatcgccctcaagggccgcatcgcgcccggcgag
caggccgccaccggccgggcgctcggcaggctctcggacatcggctggggcacccggctg
cgggcgatgctggcgcccggcgctccggacggcgcggtctccggcgaggtggtggacgcc
atggtgaccgtgctcgccgactgggcgcgcggcccgggcggctgggccgccccgggcggt
gggggcagcgaccggccggtgggcgtggtgacgatcgcctccgccacccggcccgcgctg
gtggacagcctgggggcgcgcatcgccgcgatcggccggctgccgctgctgggccgggtc
gagtacggtcccgggggcccgccgcgcggggcgcgcagcaacagcgcccagcggctgcgg
gccctgcacgacgccttcacggtgccgcccgagctggccgccgcgctggcctcctgcggc
ggcccggtgctgctggtggacgacctggtcgacaccggctggacggtcaccgtggtgtcc
aggctgctgcggcgggcgggcgccccgggtgtgctgccgctggtcctggccgtccaggcg
tag
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