Streptomyces sp. JH002: H7827_00850
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Entry
H7827_00850 CDS
T11115
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
strj Streptomyces sp. JH002
Pathway
strj00040
Pentose and glucuronate interconversions
strj01100
Metabolic pathways
strj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
H7827_00850
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H7827_00850
Enzymes [BR:
strj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
H7827_00850
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Flagellar_put
DUF6454
Motif
Other DBs
NCBI-ProteinID:
XVJ74249
LinkDB
All DBs
Position
complement(199546..200706)
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AA seq
386 aa
AA seq
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MSRTLRTTRTTVRAGVALAGGLALLAGALTAVSHAGTAERTPDTVPGTFAADPFADAPIG
YAAEAGGTTGGGGGSTVAEHLLSEYADSSGLSPSEALYQLLKAHQKSEEEGLIVHVDLSL
GQEGLKESKIDIKDVENVSILGVGDAGELDGVGFKVTRSQNIIIRNLAIHHVSEGEGDAI
EVTDNSSHVWIDHNDLSSERDNEPDKDHYDGLVDIKRNSEYITVSWNNIHDHWKTSLIGH
NDSADQAPDKITYHNNAFTSLNSRVPLIRHADVHMLNNVFTDINGSAINARMGARVLVEG
NWFENVGSGEVDSHAGYIEGPVGWFYGSSETGYWNLKDNTFIDSPHEHLESTTDFTVPYS
YRADTPAAAKQAVEQYAGTGVIDVNP
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaccttacgcaccacccgcaccaccgtcagggccggcgtcgccctggccggc
ggactcgccctgctggccggcgcgctgaccgccgtctcccacgcgggcaccgccgagcgg
accccggacaccgtgcccggcaccttcgcggcggacccgttcgccgacgcccccatcggc
tacgcggccgaggccggtggcaccaccggcggcgggggcggaagcaccgtcgccgaacac
ctgctcagcgagtacgcggacagcagcgggctcagcccctccgaggcgctgtaccagctg
ctgaaggcccaccagaagagcgaggaggaggggctgatcgtccatgtcgacctctccctc
ggccaggagggtctgaaggagagcaagatcgacatcaaggacgtcgagaacgtctcgatc
ctcggcgtcggcgacgcgggcgagctggacggggtcggcttcaaggtcacccgctcgcag
aacatcatcatccgcaacctcgccatccaccacgtctccgagggcgagggggacgcgatc
gaggtgaccgacaacagctcgcacgtgtggatcgaccacaacgacctgtccagcgaacgg
gacaacgagcccgacaaggaccactacgacggtctcgtcgacatcaagcgcaacagtgag
tacatcaccgtctcgtggaacaacatccacgaccactggaagacctcactgatcggccac
aacgacagcgccgaccaggcccccgacaagatcacttaccacaacaacgccttcacctcg
ctcaactcccgggtgccgctgatccgccacgccgacgtgcacatgctcaacaacgtgttc
accgacatcaacgggtcggccatcaacgcccggatgggcgcgcgggtgctggtcgagggc
aactggttcgagaacgtcggctccggtgaggtcgattcgcacgccgggtacatcgagggc
ccggtcggctggttctacggcagctccgagaccggctactggaacctgaaggacaacacc
ttcatcgacagccctcacgaacacctggagtccaccacggacttcaccgtcccctacagc
taccgggcggacaccccggccgccgccaagcaggcggtcgaacagtacgcgggcaccggc
gtcatcgacgtcaatccctga
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