Streptomyces sp. JH002: H7827_01855
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Entry
H7827_01855 CDS
T11115
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
strj Streptomyces sp. JH002
Pathway
strj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H7827_01855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strj03400
]
H7827_01855
Enzymes [BR:
strj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H7827_01855
DNA repair and recombination proteins [BR:
strj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H7827_01855
Prokaryotic type
H7827_01855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
FF_RHG35_4th
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
XVJ74431
LinkDB
All DBs
Position
446450..447127
Genome browser
AA seq
225 aa
AA seq
DB search
MAARPLNEIVEAGWAKALDPVADRIAAMGDFLRAEIAQGRTYLPAGQHVLRAFTQPFDEV
RVLIMGQDPYPTPGHAVGHSFSVAPEVRPLPGSLENIFRELHTDLGLPRPSNGDLTPWTR
QGVLLLNRSLTVAPRTPASHRGKGWEEVTEQAIRALVARGTPLVAILWGRDARNLRPLLG
QVPSVESAHPSPMSADRGFFNSRPFSRANALLAEQGAAPVDWTLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcacgaccgttgaatgagattgtggaagcgggctgggccaaggccctggacccg
gtggcggaccggatcgccgcgatgggcgatttcctgcgcgcggagatcgcccaggggcgg
acgtacctgcccgccgggcagcacgtcctgcgggccttcacccagcccttcgacgaggtg
cgggtgctgatcatgggacaggacccgtaccccaccccggggcacgccgtggggcacagc
ttctcggtggcgcccgaggtgcggccgctgcccggcagcctggagaacatcttccgggaa
ctgcacaccgacctggggctgccccgcccctccaacggtgatctcaccccctggacccgg
cagggggtgctgctgctcaaccggtcgctgaccgtggcgccgcgcacccccgcctcccac
cgcggcaagggctgggaagaggtcaccgaacaggccatccgggcgctggtggcgcgcggc
acgccgctggtggcgatcctgtggggccgtgacgcccgcaatctgcgcccgctgctgggc
caggtgcccagcgtggaatcggcgcacccctcccccatgtcggcggaccgcggcttcttc
aactcccggccgttcagccgggccaacgcgctgctggccgagcagggcgccgcgccggtg
gactggacgctgccgtga
DBGET
integrated database retrieval system
