Streptomyces sp. JH002: H7827_07170
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Entry
H7827_07170 CDS
T11115
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
strj Streptomyces sp. JH002
Pathway
strj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H7827_07170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
strj02000
]
H7827_07170
Transporters [BR:
strj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
H7827_07170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SelB-wing_3
Motif
Other DBs
NCBI-ProteinID:
XVJ75402
LinkDB
All DBs
Position
complement(1687917..1689914)
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AA seq
665 aa
AA seq
DB search
MNAMTRKSWQFDRRRFLAAGGAVTLGAGALGALSACTLSPEGGGGDGGGATDAEGEAPEL
KRLVDEGKLPPLAERIPAKPLVVTPVDEVGRYGGTWRNALIGAGDTFRLQFTLGYENLVR
WDLDWKATVPNVAESVTVNEDATRFTFVLREGMKWSDGEPFTVDDVLFAFHDIAMNKAVI
PDTPGHLSVDGEPARLERIDDLTLEFTFAAPRALFLEQLASGPSDMLTRLPKHYLSRFHP
DYAEDAERAARDLDYSGAMELLQDAMYAGALWTNPALPRLHAWIPGNAVGDGTKMRFRRN
PYYWKVDTAGNQLPYLNGIDFAMVQDSEVLLLNVLQGEIDMLDRHVNTTRNKPVLAAERE
SGGYRFFDLVPDKLNTLTIMLNLTCQDEAKREVFQNRDFRIGLSHAINRQELITTVHARQ
GEPWQVAPLRESELFDEEMAKQYTAFDLDLANEYLDRTGWTRRNGEGIRLGPDGRPISFR
VLVGTGAGKPELADALELIRPGWRTVGVDMRVQNEDETLRTQLIQANEHQALVWDGDGGL
DTVNTPGFFMPEWGDNSAFCPDWFTWLATEGADGQEPPEPAKEQYRIYHEQIAAEPDRER
RNALMREILDIAKEQFWTIGVSTALPGYGIVGEHFRNMVQQTYFAGKFPYPGVTNPEQYY
LDSDS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaatgacgcgtaaatcctggcagttcgaccggagaagattcctcgccgccggc
ggcgccgtcaccctgggcgccggcgcgctgggtgcgctcagcgcctgcaccctgagcccg
gagggcggcggcggtgacggcggcggcgcgaccgacgccgagggggaggcgcccgagctg
aagcggctggtggacgagggcaagctgccgccgctggccgagcgcatccccgcgaagccg
ctggtggtgaccccggtggacgaggtgggccggtacggcggcacctggcggaacgcgctg
atcggcgccggtgacaccttccggctccagttcaccctggggtacgagaacctggtgcgc
tgggacctggactggaaggcgacagtgcccaatgtcgccgagtcggtgaccgtcaacgag
gacgccacccggttcaccttcgtgctgcgggagggcatgaagtggtccgacggcgagccg
ttcacggtggacgacgtgctgttcgccttccacgacatcgccatgaacaaggccgtcatc
cccgacaccccgggccatctgtcggtggacggtgaaccggcccgcctggagcggatcgac
gatctcaccctggagttcaccttcgccgcgccccgggcgctgttcctcgaacagttggcg
agcgggcccagcgacatgctcacccggctgcccaagcactatctgagccggttccacccc
gattacgccgaggacgccgagcgggccgccagggacctggactactcgggcgccatggaa
ctgctccaggacgccatgtacgcgggcgcgctgtggaccaatccggcactgccccggctg
cacgcctggataccggggaacgcggtcggcgacggcaccaagatgcggttccggcgcaat
ccgtactactggaaggtggatacggcgggcaatcagctgccgtatctcaacggcatcgac
ttcgccatggtgcaggactccgaggtgctgctgctcaatgtgctccagggtgagatcgac
atgctggaccggcatgtcaacaccacccgcaacaagccggtgctggcggccgaacgggaa
tcgggcgggtaccggttcttcgatctggtgcccgacaagctcaacaccctcaccatcatg
ctcaatctcacctgccaggacgaggcgaagcgggaggtcttccagaaccgggacttccgg
atcgggctctcccacgccatcaaccggcaggaactgatcaccaccgtgcacgcccgtcag
ggcgagccctggcaggtggcgccgctgcgggaatcagagctgttcgacgaggaaatggcc
aagcagtacaccgcattcgatctcgatctcgccaatgagtatctggaccgcaccggctgg
acccggcgcaatggcgagggcatcaggctcggcccggacggcaggccgatctccttccgg
gtgctggtgggcaccggggccggcaagccggagctggcggacgcgctggaactgatccgc
ccgggctggcgcacggtcggggtcgacatgcgggtccagaacgaggacgagacgctgcgt
acccagctcatccaggccaatgagcaccaggcgctggtctgggacggcgacggcggcctg
gacacggtcaacacccccggtttcttcatgccggaatggggcgacaattcggcattctgc
ccggattggttcacctggctggcgacggaaggggccgacggccaggaacccccggagccg
gccaaggagcagtaccggatctaccacgagcagatcgccgccgagccggaccgcgagcgc
cgcaacgccctgatgcgggaaatcctggacatcgccaaggaacagttctggacgatcggc
gtgtccaccgcgctgcccggctacggcatcgtcggcgagcacttccgcaacatggtccag
cagacctatttcgccggcaagttcccctatccgggtgtcaccaaccccgagcagtactac
ctcgattccgactcctga
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