Streptomyces sp. JH002: H7827_11135
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Entry
H7827_11135 CDS
T11115
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
strj Streptomyces sp. JH002
Pathway
strj03420
Nucleotide excision repair
strj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H7827_11135 (pcrA)
03430 Mismatch repair
H7827_11135 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strj03400
]
H7827_11135 (pcrA)
Enzymes [BR:
strj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H7827_11135 (pcrA)
DNA repair and recombination proteins [BR:
strj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H7827_11135 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
H7827_11135 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
XVJ76118
LinkDB
All DBs
Position
complement(2509670..2512108)
Genome browser
AA seq
812 aa
AA seq
DB search
MSGLFDDSVLADLVPPGAEPPPPPPEDDHREEEVPHALFAASSEVAERDLWYRNGAPKPV
MDPAQLLEGLNEQQRAAVTHSDTPLLIVAGAGSGKTRVLTHRIAYLLAARGAHPGQILAI
TFTNKAAGEMKERVEELVGPRAAAMWVMTFHSACVRILRRESKHLGFTSSFSIYDAADSK
RLMALVCRDLDLDPKRFPPKSFSAKVSNLKNELIDEETFAGQATDGFEKTLAEAYALYQS
RLREANALDFDDIIMTTVHLLQAFPDIAEHYRRRFRHILVDEYQDTNIAQYTLIRELVGT
EEPGELCVVGDADQSIYAFRGATIRNILQFEEDYPQATTLLLEQNYRSTQTILSAANAVI
ERNESRRPKNLWTQAGAGARIIGYVADTEHDEAQFAADEIDRLTDAGDAKPGDVAVFYRT
NAQSRVFEEVFIRVGLPYKVVGGVRFYERREVRDVLAYLRVLANPEDTVPLRRILNVPKR
GIGDRAEAMIDALAQREKISFAQALVRVEEAYGMAARSMNAVKRFNVLMEELRTIAESGA
GPATVLEAVLEQTGYLAELQSSTDPQDETRVENLQELASVALEFEQEREGEEEETSGTLA
EFLERVALVADSDQIPDEAEGEDKGVITLMTLHTAKGLEFPVVFLSGMEDGVFPHMRSLG
KTKELEEERRLAYVGITRARERLYVTRAALRSAWGQPQHNPPSRFLEEIPEQHLEWRRTG
PLAPPPPAPIGRRPASSGTATGGFATNRAPARGGTQREVVALTAGDRVSHDSFGLGRVVS
VQGSGDRAEATIDFGGEKPKRLLLRYAPVEKL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcctctttgacgacagtgttctggcggatctcgtaccccccggtgcggagcca
ccgccgccccctcccgaggacgaccaccgcgaggaggaggtcccgcatgccctcttcgcc
gcgtcctccgaggtggccgaacgcgacctctggtaccgcaacggtgcccccaagcccgtc
atggacccggcacagctgctcgaaggactgaacgagcagcagcgcgccgccgtcacccac
agcgacacgccgctgctcatcgtggccggtgccggctccggcaagacccgggtcctcacc
caccgcatcgcgtacctgctggccgcccgcggcgcccaccccgggcagatcctcgccatc
accttcaccaacaaggccgccggtgagatgaaggagcgcgtcgaggaactggtcggcccg
cgcgccgccgcgatgtgggtgatgaccttccacagcgcctgcgtgcgcatcctgcgccgc
gagagcaagcacctcggcttcacctccagtttctccatctacgacgccgccgactccaag
cggctgatggcgctggtctgccgcgacctggacctggaccccaagcggttcccgcccaag
tcgttcagcgccaaggtctccaacctcaagaacgagctgatcgacgaggagaccttcgcc
ggacaggccaccgacggttttgagaagaccctcgccgaggcgtacgcgctctaccagtcc
cggctgcgcgaggccaacgcgctggacttcgacgacatcatcatgaccaccgtccacctg
ctccaggcgttccccgacatcgccgagcactaccggcggcgcttccggcacatcctggtg
gacgagtaccaggacaccaacatcgcccagtacaccctcatccgcgagctggtgggcacc
gaggagccgggtgaactgtgcgtggtcggtgacgccgaccagtccatctacgccttccgc
ggcgccaccatccgcaacatcctccagttcgaggaggactacccgcaggccaccaccctg
ctcctggagcagaactaccgctccacccagaccatcctctccgccgccaacgccgtcatc
gagcgcaacgagagccgccgtcccaagaacctgtggacccaggccggcgccggcgcccgc
atcatcggctacgtcgcggacaccgagcacgacgaggcccagttcgcggccgacgagatc
gaccggctcacggacgcgggcgacgcgaagccgggcgatgtcgccgtcttctaccgcacc
aacgcccagtcccgggtcttcgaagaggtcttcatccgggtcggcctgccctacaaggtc
gtcggcggcgtccgcttctacgagcggcgagaggtccgcgacgtcctcgcctatctgcgg
gtgctggccaaccccgaggacaccgtgccgctgcgccgcatcctcaacgtccccaagcgc
ggcatcggcgaccgcgccgaggcgatgatcgacgcgctcgcccagcgcgagaagatctcc
ttcgcgcaggcgctcgtacgggtggaggaggcgtacggcatggcggcgcgttccatgaac
gccgtcaaacgcttcaacgtcctcatggaggagctgcgcacgatcgccgaatccggcgcc
gggcccgccaccgtactggaggcggtgctcgaacagaccggctatctggcggagttgcag
tcctccaccgacccgcaggacgagacccgggtggagaacctccaggagctggcctccgtc
gccctggaattcgagcaggagcgcgaaggcgaggaggaggaaacctccggcaccctcgcc
gaattcctcgaacgggtcgcgctggtcgccgactccgaccagatcccggacgaggcggag
ggcgaggacaagggggtgatcaccctcatgaccctgcacaccgccaagggcctggagttc
ccggtggtcttcctcagcggcatggaggacggcgtcttcccgcacatgcgctcgctcggc
aagaccaaggagctggaggaggagcgccggctcgcgtacgtcggcatcacgcgggcgcgc
gagcggctgtacgtcacccgggcggcgctgcgcagcgcctgggggcagccgcagcacaac
ccgccctccaggttcctggaggagatccccgaacagcacctggagtggcgccgcaccggc
ccgctcgcgccgcccccgcccgccccgatcggccgccgccccgcctcctccgggacggcg
accggcggcttcgcgaccaaccgggcgcccgccaggggcggtacgcagcgggaggtggtg
gcgctgacggccggcgaccgggtcagccacgactcgttcggcctgggccgggtggtctcg
gtgcagggcagcggggaccgggcggaggcgacgatcgacttcggcggggaaaaacccaag
cggttgctgctgcgttacgctccggtggaaaagctctga
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