Streptomyces sp. JH002: H7827_18105
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Entry
H7827_18105 CDS
T11115
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
strj Streptomyces sp. JH002
Pathway
strj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H7827_18105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strj03021
]
H7827_18105
03400 DNA repair and recombination proteins [BR:
strj03400
]
H7827_18105
Enzymes [BR:
strj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H7827_18105
Transcription machinery [BR:
strj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H7827_18105
DNA repair and recombination proteins [BR:
strj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H7827_18105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
XVJ77362
LinkDB
All DBs
Position
3962265..3963287
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFSTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNNKGKLEMELTVERGRGYVSAVQNKAAGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVVDVETKEAMRPRDAMASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTTAADAFGAEDDGDTGFAETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctctttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagcccggcttcgggtacacgctcggtaactccctgcggcgc
accctgctgtcctccatcccgggtgcggccgtcaccagcatccgtgtcgacggcgtgctg
cacgagttctccaccgtgccgggcgtcaaggaggatgtgaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagcccgtggtgatgtacctgcgcaagcag
ggtcccggcctggtgaccgcggccgacatcgccccgccggccggggtcgaggttcacaac
cccgacctggtgctggcgaccctgaacaacaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaaggcggcgggccaggagatcggc
cggatcccggtcgactcgatctacagcccggtgctgaaggtgacctacaaggtcgaggcc
acccgtgtggagcagcgcaccgacttcgacaagctggtcgtcgacgtcgagaccaaggag
gccatgcgtccgcgcgacgccatggcgtccgccggcaagaccctggtcgagctgttcggc
ctggcgcgtgagctgaacgtcgacgccgagggcatcgacatgggcccctcgccgaccgac
gcggcgctcgccgccgacctggcgctgccgatcgaggagctggagctgaccgtccgctcc
tacaactgcctcaagcgtgagggcatccactcggtgggcgagctggtggcccgctccgag
gccgatctgctggacatccggaacttcggtgccaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccaccgcc
gccgacgccttcggggccgaggacgacggggacacgggcttcgcggagaccgagcagtac
tga
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