Streptomyces sp. JH002: H7827_18115
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Entry
H7827_18115 CDS
T11115
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
strj Streptomyces sp. JH002
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
strj03016
]
H7827_18115 (truA)
Enzymes [BR:
strj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
H7827_18115 (truA)
Transfer RNA biogenesis [BR:
strj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H7827_18115 (truA)
Prokaryotic type
H7827_18115 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
XVJ77364
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Position
3963995..3964834
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AA seq
279 aa
AA seq
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MSETVRVRLDVSYDGAAFSGWARQRGRRTVQEELEEALRVVTRSARGYELTVAGRTDAGV
HARGQVAHVDLPAEVWEEQRENLHRRLTGRLPQDVRVRRVSRAPADFDARFSAIWRRYVY
RVSDHPGGVDPLRRGHVLWHNWPLDMAAMDAASQRLLGEHDFAAYCKRREGATTIRTLRR
LSWERGADGVLEGTVEADAFCHNMVRSLVGALLFVGDGHRDPEWPGKVLAAGVRDSAVHV
VRPHGLTLEEVGYPADDLLAARSREARNVRTLPASAGCC
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgagacggttcgggtacgtcttgacgtgtcctacgacggcgcggcgttctccggc
tgggcgcgccagcgggggcggcgcaccgtacaggaggagctggaggaggcgctgcgggtc
gtcacccgctcggcgcgggggtacgagctgacggtggccggccgtaccgacgccggggtg
cacgcgcgcggccaggtggcccacgtggacctgccggcggaggtgtgggaggagcagcgg
gagaacctgcaccgccgcctgaccggccggctgccgcaggacgtacgggtgcgccgggtc
tcccgcgccccggcggatttcgacgcgcgcttctcggcgatctggcgccggtacgtctac
cgggtgagcgaccatccgggcggggtggacccgctgcggcgcggccatgtgctgtggcac
aactggccgctggacatggcggcgatggacgccgcctcccagcggctgctgggcgaacac
gacttcgcggcgtactgcaagcggcgcgagggcgcgacgacgatccgtacgctgcgccgg
ctcagctgggagcgcggcgccgacggggtgctggagggcaccgtggaggcggacgcgttc
tgccacaacatggtgcgctccctggtgggcgccctgctgttcgtgggggacgggcaccgg
gaccccgagtggccggggaaggtgctggcggccggggtgcgcgactcggcggtgcacgtg
gtgcgcccgcacgggctgaccctggaggaggtcggctacccggcggacgacctgctggcg
gcccgcagccgggaggcgcgcaacgtacgcaccctcccggcgtcggcgggctgctgctag
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