Streptomyces sp. JH002: H7827_18470
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Entry
H7827_18470 CDS
T11115
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
strj Streptomyces sp. JH002
Pathway
strj00040
Pentose and glucuronate interconversions
strj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
H7827_18470
Enzymes [BR:
strj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
H7827_18470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
XVJ77425
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Position
4030755..4033109
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AA seq
784 aa
AA seq
DB search
MRSLSGRIRAGAGGLAIALLAAGAGTAVAAPAPEANNAQVWEAVTFGQSTDLNFATNVLP
EKIGTNYAEPEHPGTIDGKIVMESRGGKLAPGHDGLTFYQTGLDPRTDNFVLTADMTVEQ
FGPETGAAPNSQDSAGIMVRDVNGAPRQDPMVAGFEEVPAASNIFGAGMLRQGISGLVRT
GVTEPWGNPGSALKATPFTTDSRYTLPVGTPVSLRLERTDTEFVMSATFTHAGEPATFEQ
RVTGADWVQDIDPDRMYVGFYAARNAKVTFENAHLELSGAQTQPRPPTEPVPVQPALTLH
SAPETSTAQYTLRARTNTAGTVTVTDERGKRVAHKRLAAGEFFSHPVRLKDESTGYTFTL
VTGEGQTVTRTLTVTRTAYGERGDGAVIHASPTGTATAAGTAARPVDLETALRHVAPGGQ
VLLHGGTYEPAGTLNLSASYSGLPNKPKTLKPYRDQQVIIDGRGALPVVLRLDADNWRVE
GFRITRAASNALRMSGSHNVISAMTFNYNGDTGFQITGSGEDPAYWPRHNLITGCESHDN
RDASDINADGFAAKLGVGEGNVFRGNIAHHNIDDGWDLYNRTNEGANLPITLENNVSYAN
GRLSNGYNEDSNTGNGFKLGGEGLPVDHVVRGNIAYDNNMDGFSDNFNPGRLTLTNNTAF
DNKRFNYLIRFSPYFSPEEQGVYRDNLSFRTPGGRGGDEPETDFIAGDVDRTNVLFDGER
ATNADGTTVATAADFRSLELPERYARGRDGTPEHGDFLRPAQRSPLNKAGTHRSVIGALD
GSRR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgagatccctgtcagggcggatcagagcgggagccggaggtctggcgatcgcgttgctg
gccgccggcgcgggcacggcggtggccgcacccgccccggaggcgaacaacgcacaggtg
tgggaggccgtcaccttcggccagtccaccgacctcaacttcgcgaccaacgtgctgccg
gagaagatcggcaccaactacgcggaacccgagcaccccggcaccatcgacgggaagatc
gtcatggagagccgcggcggcaaactcgcccccggtcacgacgggctgaccttctaccag
accggcctcgacccccggaccgacaacttcgtgctcaccgccgacatgacggtggagcag
ttcgggcccgagaccggcgcggcgcccaactcgcaggacagcgcgggcatcatggtccgc
gacgtcaacggcgcaccccgccaggacccgatggtcgccggcttcgaggaagtgcccgcc
gcctccaacatcttcggcgccgggatgctgcgccagggcatcagcggcctggtccgcacc
ggggtcaccgagccctgggggaacccgggcagcgccctgaaggccacccccttcaccacc
gactcccggtacacactgccggtcggcaccccggtcagtctgcgtctggagcgcaccgac
accgagttcgtgatgtcggcgaccttcacccacgccggggagcccgccaccttcgagcag
cgggtgaccggcgccgactgggtccaggacatcgaccccgaccgcatgtacgtcggcttc
tacgccgcccgcaacgccaaggtgaccttcgagaacgcccacctcgaactgagcggggca
cagacccagccgcgcccgcccaccgagccggtgcccgtccagcccgcgctcaccctgcac
tcggcgcccgagaccagcaccgcccagtacacgctgcgggcccgtacgaacacggccggc
acggtcaccgtcaccgacgagcggggcaagcgggtggcccacaagcggctggccgccggg
gagttcttctcccacccggtccggctgaaggacgagagcaccggctacaccttcaccttg
gtgaccggtgagggccagaccgtcacccgcacgctcaccgtcacccgcaccgcgtacggg
gagcgcggcgacggcgccgtcatccacgcctcgcccaccggtacggccaccgcggccggt
accgccgcccgcccggtggacctggagaccgccctgcgccatgtggcccccggcgggcag
gtgctgctgcacggcggaacgtacgagccggccggcacgctgaacctgtccgcctcctac
agcgggctgcccaacaagccgaagacgctcaagccgtaccgcgaccagcaggtgatcatc
gacggacgcggcgcactccccgtcgtgctgcggctggacgccgacaactggcgggtcgag
ggcttccgcatcacccgggcggccagcaacgcgctgcggatgagcggcagtcacaacgtc
atcagcgcgatgacgttcaactacaacggggacaccggcttccagatcaccggcagcggt
gaggacccggcgtactggccccggcacaacctgatcaccggctgcgagtcgcacgacaac
cgcgacgcgagcgacatcaacgccgacgggttcgcggccaagctcggcgtgggcgagggc
aacgtcttccgcgggaacatcgcgcaccacaacatcgacgacggctgggacctgtacaac
cgcaccaacgagggcgccaacctgcccatcaccctggagaacaacgtctcctacgccaac
ggccggctctccaacggctacaacgaggacagcaacaccggcaacggcttcaagctcggt
ggcgagggcctgcccgtggaccacgtggtgcgcggcaacatcgcctacgacaacaacatg
gacggcttctcggacaacttcaaccccgggcggctgaccctgacgaacaacaccgccttc
gacaacaagcggttcaactacctgatccggttcagcccctacttctccccggaggagcag
ggcgtctaccgcgacaacctctccttccggactccgggcggccggggcggcgacgagccg
gagacggacttcatcgccggggacgtcgatcgcaccaacgtgctcttcgacggggagcgg
gccacgaacgcggacggtacgacggtcgcgacggccgccgacttccgctcgctcgaactg
cccgagcggtacgcgcgcggccgggacggcacccctgaacacggcgacttcctgcgcccg
gcgcagcgttccccgctgaacaaggccggtacgcaccgttcggtgatcggcgcgctggac
ggctcgcggcgctga
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