Streptomyces sp. JH002: H7827_18615
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Entry
H7827_18615 CDS
T11115
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
strj Streptomyces sp. JH002
Pathway
strj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H7827_18615 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strj03400
]
H7827_18615 (xth)
Enzymes [BR:
strj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
H7827_18615 (xth)
DNA repair and recombination proteins [BR:
strj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H7827_18615 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
KorB_C
Motif
Other DBs
NCBI-ProteinID:
XVJ77452
LinkDB
All DBs
Position
complement(4060336..4061145)
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AA seq
269 aa
AA seq
DB search
MHTVTTVNVNGLRAAATKGYREWLTATEADVVCLQEVRAEEKQLPQEVREPAGWHAYWAP
AAAKGRAGVALLTRREPDAVRTGFGVAEFEDSGRYLEADLPGLTVASLYLPSGEVGTERQ
AEKERFMAAFLPYLVGLRERAAAQGREVLVCGDWNIAHQEADLKNWRANRKNSGFLPEER
AWLTRVFAAEGGYTDVVRALHPEQEGPYSWWSYRGRAFDNDAGWRIDLLAATAGLAGRCV
KAYVERAATHGERWSDHAPVTAVFEGLPG
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgcacaccgtcaccacggtcaacgtcaacggcctgcgggccgccgccaccaagggctac
cgggagtggctgaccgccaccgaggcggacgtggtgtgcctccaggaggtgcgcgccgag
gagaagcagctgccccaggaggtacgggagccggccggctggcacgcgtactgggcgccg
gccgccgccaagggccgggcgggtgtggccctgctcacccggcgcgagccggacgccgtg
cgcaccgggttcggggtcgcggagttcgaggactcggggcgctatctggaggccgacctg
ccgggcctgaccgtcgccagcctctacctgccctccggcgaggtgggcaccgagcggcag
gcggagaaggagcgcttcatggcggcgttcctgccgtatctggtcgggctgcgcgagcgt
gccgccgcgcaggggcgcgaggtgctggtgtgcggcgactggaacatcgcccaccaggag
gccgatctgaagaactggcgcgccaaccgcaagaactccggcttcctcccggaggaacgc
gcctggctgacccgggtgttcgcggccgagggcggctacaccgatgtggtgcgcgcgctg
caccccgagcaggagggcccctactcctggtggtcctaccggggccgggcgttcgacaac
gacgcgggctggcggatcgatctgctggcggccaccgcggggctggccggccggtgcgtc
aaggcgtacgtggagcgggcggcgacgcacggggagcgctggtcggaccacgccccggtg
acggcggtcttcgagggcctgccgggctga
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