Streptomyces sp. JH002: H7827_24945
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Entry
H7827_24945 CDS
T11115
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
strj Streptomyces sp. JH002
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
strj03009
]
H7827_24945 (der)
Ribosome biogenesis [BR:
strj03009
]
Prokaryotic type
GTPases
H7827_24945 (der)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
GTP_EFTU
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
Ras
Roc
Arf
AAA_16
MeaB
NTPase_1
AAA_22
TniB
AAA_33
ATPase_2
AAA_24
NB-ARC
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
XVJ78570
LinkDB
All DBs
Position
5443950..5445419
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AA seq
489 aa
AA seq
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MNDQNDPGDAGGHGALGDAEYAEFMELAAQEGFDAEEIDSELAAANAGPLPVLAVVGRPN
VGKSTLVNRIIGRREAVVEDRPGVTRDRVTYEAEWAGRRFKVVDTGGWEQDVLGIDASVA
AQAEYAIEAADAVVFVVDAAVGSTDTDEAVVKLLRKAGKPVVLCANKVDGPSGEADAAYL
WSLGLGEPYPVSALHGRGTGDMLDAVLEAMPEAPPQTFGSAPGGPRRIALIGRPNVGKSS
LLNKVAKEDRVVVDATAGTTRDPVDELIDLGGKVWRFVDTAGIRRRVHLQDGADYYASLR
TAAALEKAEAAVVLIDVTEPISVQDTRIITMAVEAGRALVIAYNKWDLMDEERRFYLERE
IERDLVQVQWAPRVNISAFTGRHMEKLVPAIETALDAWQTRVPTGKLNAFLGELVASHPH
PVRGGKQPRILFGTQAGTKPPRFVLFASGFLEAGYRRFIERRLREEFGFEGTPIKVSVRV
REKRGRVKK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccagaacgatcccggcgacgcgggcgggcacggtgcgctgggcgacgccgag
tacgcggagttcatggagctggccgcgcaggagggcttcgacgccgaggagatcgacagc
gagctggcggcggccaacgccgggccgctgcccgtgctcgccgtcgtgggccgccccaac
gtcggcaaatcgacgttggtgaaccggatcatcggccgccgcgaggccgtggtcgaggac
cgcccgggcgtcacccgcgaccgcgtcacctacgaggccgagtgggcgggccgccgcttc
aaggtggtggacaccggcggctgggagcaggacgtcctcggtatcgacgcctccgtagcg
gctcaggccgagtacgccatcgaggccgccgacgccgtggtcttcgtggtggacgccgcc
gtgggctccacggacaccgacgaggccgtggtcaagctgctgcgcaaggcgggcaagccc
gtggtgctgtgcgccaacaaggtggacggcccctccggcgaggccgacgccgcctacctg
tggtccctgggcctcggcgagccctaccccgtctccgcgctgcacggccggggcaccggc
gacatgctggacgcggtcctggaggccatgccggaggcgcccccgcagaccttcggcagc
gcgcccggcggcccgcgccggatcgccctcatcgggcgccccaacgtcggcaagtcctcg
ctgctgaacaaggtggccaaggaggaccgggtggtcgtcgacgccaccgccgggaccacc
cgcgaccccgtggacgagctcatcgacctgggcggcaaggtctggcgcttcgtggacacc
gccggcatccggcgccgcgtccacttgcaggacggggccgactactacgcctcgctgcgc
accgccgccgccctggagaaggcggaggccgcggtcgtcctcatcgacgtcaccgagccg
atcagcgtgcaggacacccgcatcatcaccatggcggtggaggccggccgggcgctggtg
atcgcgtacaacaagtgggacctcatggacgaggagcgccgcttctacctggaacgggag
atcgagcgcgacctggtgcaggtgcagtgggcgccgcgcgtcaacatctccgccttcacc
ggccggcacatggagaagctggtgccggccatcgagaccgcgctggacgcctggcagacc
cgggtgcccaccggcaagctgaacgccttcctcggtgagctggtggcctcccacccgcac
ccggtgcgcggcggaaagcagccccggattctgttcggcacccaggccgggacgaagccg
ccgcgcttcgtcctgttcgcctcgggcttcctggaggccggctaccggcgcttcatcgag
cgccgcctgcgcgaggagttcggcttcgagggcaccccgatcaaggtgtcggtgcgggtg
cgcgagaagcgcggccgggtcaagaagtag
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