Streptomyces sp. JH002: H7827_26535
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Entry
H7827_26535 CDS
T11115
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
strj Streptomyces sp. JH002
Pathway
strj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H7827_26535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strj03400
]
H7827_26535
DNA repair and recombination proteins [BR:
strj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H7827_26535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
XVJ78867
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All DBs
Position
5785579..5786550
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AA seq
323 aa
AA seq
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MRSLWKGTISFGLVSIPVKVVSATENHSVSFRQIHTADDGRIRYRKVCELDGEEVGGDEI
GKAYEAADGSIVQLTDDDLAALPLPTARTVDILGFVPVSSIDPYQLDRSYYLAPDTGAIK
PYALLREALRRSGKGAIAKLAMRGRETLALLRALEGDGEAVLGMHTLLWPDEIRPATGVV
PGERVTVRDAELDLADTLMDTLGSVDMAELHDEYRAAVEALVTAKLEGRVPEEITERPAT
GGRVIDLMSALEDSVRSARQARGEGEPQEEATVTPIKKKAAAKKSPAKKKATAGKSTAKK
STAKKSTSKKTAAKKTTTRKRAS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcgctgtggaagggcaccatctccttcggcctggtcagcatcccggtgaaggtc
gtcagcgccaccgagaaccactcggtgtccttccggcagatccacaccgccgatgacggc
cggatccgctaccgcaaggtgtgcgagctggacggggaggaggtgggcggcgacgagatc
ggcaaggcgtacgaggcggccgacggctccatcgtccagctcaccgacgacgacctggcc
gcgctgccgctgcccaccgccaggaccgtcgacatcctcggcttcgtcccggtcagcagc
atcgacccctaccagctggaccgctcctactacctggccccggacaccggcgcgatcaag
ccctacgcgctgctgcgggaggccctgcggcgcagcggcaagggcgccatcgccaagctc
gccatgcgcgggcgcgagacactggccctgctgcgcgccctggagggggacggcgaggcg
gtcctggggatgcacaccctgctgtggcccgacgagatccgcccggccaccggggtggtg
cccggcgagcgggtcaccgtccgggacgccgaactggacctcgccgacaccctgatggac
accctcggctcggtggacatggccgaactccacgacgagtaccgcgcggccgtcgaggcg
ctggtcaccgccaagctggagggccgggtgccggaggagatcaccgaacggccggccacc
ggcggccgggtgatcgacttgatgtcggccctggaggacagcgtgcgcagcgcccgccag
gcccgcggcgagggggaaccgcaggaggaggcgaccgtcacgccgatcaagaagaaggcc
gccgccaagaagtccccggcgaagaagaaggccacggccggcaagagcaccgcaaagaag
agcaccgctaagaaaagcacgtcgaagaagaccgccgccaagaagaccacgacccgcaaa
cgggcctcctga
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