Streptomyces sp. N50: R2B38_05140
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Entry
R2B38_05140 CDS
T11501
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
strk Streptomyces sp. N50
Pathway
strk00220
Arginine biosynthesis
strk00240
Pyrimidine metabolism
strk00250
Alanine, aspartate and glutamate metabolism
strk01100
Metabolic pathways
strk01110
Biosynthesis of secondary metabolites
strk01240
Biosynthesis of cofactors
Module
strk_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
R2B38_05140 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
R2B38_05140 (carB)
00220 Arginine biosynthesis
R2B38_05140 (carB)
Enzymes [BR:
strk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
R2B38_05140 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp
ATP-grasp_3
ATP-grasp_4
CoA_binding_2
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
WOX08298
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Position
complement(1244189..1247497)
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AA seq
1102 aa
AA seq
DB search
MPKRTDIQSVLVIGSGPIVIGQAAEFDYSGTQACRILRAEGIRVILVNSNPATIMTDPEI
ADATYVEPITPDFVEKIIAKERPDALLPTLGGQTALNTAISLHEAGTLEKYGVELIGANV
EAINKGEDRDLFKGVVEAVRRKIGYGESARSVICHSMDDVIAGVDTLGGYPVVVRPSFTM
GGAGSGFAHDEEELRRIAGQGLTLSPTTEVLLEESILGWKEYELELMRDKNDNVVVVCSI
ENFDPMGVHTGDSITVAPAMTLTDREYQVLRDVGIAIIREVGVDTGGCNIQFAIDPVDGR
VIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETPASFEPTLDYV
VVKAPRFAFEKFPSADSTLTTTMKSVGEAMAIGRNFTEAFQKALRSLEKKGSQFTFVGEP
GDKVQLLEEAVRPTDGRINTVMQAIRAGATQEEVFEYTKIDPWFVDQLFLIKEIADELAA
AAKLDPELLAEAKRHGFSDQQIGEIRGLREDVVREVRHALGIRPVYKTVDTCAAEFAAKT
PYFYSSYDEENEVAPREKPAVIILGSGPNRIGQGIEFDYSCVHASFALSDAGYETVMVNC
NPETVSTDYDTSDRLYFEPLTLEDVLEIVHAEQQAGPVAGVIVQLGGQTPLGLAQALKDN
GVPVVGTSPEAIHAAEDRGAFGQVLAEAGLPAPKHGTATTFVGAKAIADEIGYPVLVRPS
YVLGGRGMEIVYDETRLESYIAESTEISPSRPVLVDRFLDDAIEIDVDALYDGHELYLGG
VMEHIEEAGIHSGDSACALPPITLGGFDIKRLRTSTEAIAKGVGVRGLINIQFAMAGDIL
YVLEANPRASRTVPFTSKATAVPLAKAAARISLGATVAELRAEGLLPAHGDGGELPLDAP
ISVKEAVMPWSRFRDIHGRGVDTVLGPEMRSTGEVMGIDSVFGTAYAKSQAGAYGPLPTK
GRAFISVANRDKRSMIFPARELVAHGFELLATSGTAEVLRRNGLNATVVRKQSEGVGPNG
EKTIVQLIHDGEVDLIVNTPYGTGGRLDGYEIRTAAVARSVPCLTTVQALAAAVQGIDAL
NHGDVGVRSLQEHAQHLTAARD
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaagcgcaccgatatccagtccgtcctggtcatcggctccggcccgatcgtcatc
ggccaggccgccgagttcgactactccggcacccaggcctgccgcatcctgcgcgccgag
ggcatccgcgtcatcctggtcaactcgaacccggcgacgatcatgaccgacccggagatc
gccgacgccacctacgtcgagccgatcaccccggacttcgtcgagaagatcatcgccaag
gagcgcccggacgcgcttctgcccaccctgggcggtcagacggcgctcaacaccgccatc
tcgctgcacgaggccggcaccctggagaagtacggcgtcgagctgatcggcgccaacgtc
gaggcgatcaacaagggcgaggaccgcgacctcttcaagggcgtcgtcgaggccgtccgc
cggaagatcggctacggcgagtccgcccgctcggtcatctgtcactccatggacgacgtg
atcgccggtgtcgacacgctcggcggctacccggtcgtcgtccgcccctccttcaccatg
ggcggcgccggttccggtttcgcgcacgacgaggaggagctgcgccgcatcgccggccag
ggcctcacgctgtctccgaccaccgaggtcctcctggaggagtccatcctcggctggaag
gagtacgagctggagctgatgcgcgacaagaacgacaacgtcgtggtcgtctgctccatc
gagaacttcgaccccatgggcgtgcacaccggtgactcgatcaccgtcgccccggcgatg
acgctgaccgaccgcgagtaccaggtgctgcgcgacgtgggcatcgcgatcatccgcgag
gtcggtgtcgacaccggcggctgcaacatccagttcgcgatcgacccggtcgacggccgc
gtcatcgtcatcgagatgaacccgcgcgtgtcgcgttcctcggcgctggcctccaaggcg
accggcttcccgatcgccaagatcgccgccaagctggccgtcggctacaccctcgacgag
atcccgaacgacatcacgcgcgagaccccggcctccttcgagccgaccctcgactacgtc
gtagtgaaggccccgcgtttcgccttcgagaagttcccgagcgccgactccaccctcacg
accaccatgaagtcggtcggcgaggccatggccatcggccgcaacttcaccgaggccttc
cagaaggcgctgcgctccctggagaagaagggcagccagttcacgttcgtcggcgagccc
ggcgacaaggtccagctcctggaggaggccgtacggcccaccgacggccggatcaacacc
gtcatgcaggccatccgcgcgggcgccacccaggaggaggtcttcgagtacacgaagatc
gacccctggttcgtcgaccagctcttcctcatcaaggagatcgccgacgagctggccgcc
gccgccaagctggacccggagttgctcgccgaggccaagcggcacggcttctccgaccag
cagatcggtgagatccgcggcctgcgcgaggacgtcgtccgcgaggtccggcacgcgctc
ggcatccgcccggtctacaagacggtcgacacctgcgccgccgagttcgccgcgaagacg
ccgtacttctactcgtcctacgacgaggagaacgaggtcgccccgcgtgagaagcccgcg
gtcatcatcctggggtcgggccccaaccgcatcggccagggcatcgagttcgactactcc
tgcgtccacgcctccttcgcgctcagcgacgcgggctacgagaccgtgatggtcaactgc
aaccccgagaccgtctcgacggactacgacacctccgaccgcctgtacttcgagccgctc
acgctggaagacgtgctggagatcgtccacgccgagcagcaggccggtcccgtcgcgggc
gtcatcgttcagctcggcggccagacaccgctgggcctggcgcaggcactgaaggacaac
ggcgtgccggtcgtgggtacttcgcccgaggcgatccacgccgccgaggaccgcggcgcc
ttcggccaggtcctcgccgaggcgggcctcccggcccccaagcacggcacggcgaccacc
ttcgtcggcgccaaggcgatcgccgacgagatcggctacccggtcctcgtccgcccgtcg
tacgtcctcggtggccgcggcatggagatcgtctacgacgagacccgcctggagtcgtac
atcgccgagtccacggagatcagcccctcgcggccggtcctggtcgaccgcttcctggac
gacgccatcgagatcgacgtggacgccctctacgacggccacgagctgtacctcggcggc
gtcatggagcacatcgaggaggccggcatccactccggcgactcggcctgcgccctgccg
ccgatcaccctgggcggcttcgacatcaagcgcctgcggacgtcgaccgaagccatcgcc
aagggtgtcggcgtccgcggactgatcaacatccagttcgcgatggccggcgacatcctc
tacgtcctggaggccaacccgcgcgcgtcccgtacggtccccttcacctcgaaggcgacc
gcggtgccgctcgcgaaggccgccgcccgcatctcgctgggcgcgaccgtcgccgaactg
cgcgccgaggggctgctcccggcccacggcgacggcggtgaactcccgctggacgcgccg
atctccgtcaaggaggccgtcatgccgtggtcgcgcttccgcgacatccacggccgcggc
gtcgacacggtgctgggcccggagatgcgctccaccggcgaggtcatgggcatcgactcc
gtcttcggcacggcgtacgccaagtcccaggcgggcgcctacggcccgctgcccaccaag
ggccgcgcgttcatctcggtcgccaaccgcgacaagcgctcgatgatcttcccggcacgc
gaactggtcgcccacggcttcgagttgctcgccacctccggcaccgccgaggtcctcagg
cgcaacggcctcaacgccacggtcgtccgcaagcagtccgagggcgtcggcccgaacggc
gagaagaccatcgtccagctcatccacgacggcgaggtcgacctcatcgtcaacaccccc
tacggcaccggcggccgcctcgacggctacgagatccgcaccgccgccgtggcgcggtcc
gtgccctgcctcacgacggtccaggcgctcgccgccgccgtccagggcatcgacgccctc
aaccacggtgacgtgggcgtgcgttcactccaggaacacgcacagcacttgaccgcggcc
cgcgactag
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