Streptomyces sp. N50: R2B38_09175
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Entry
R2B38_09175 CDS
T11501
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
strk Streptomyces sp. N50
Pathway
strk00470
D-Amino acid metabolism
strk00550
Peptidoglycan biosynthesis
strk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R2B38_09175 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R2B38_09175 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
strk01011
]
R2B38_09175 (murD)
Enzymes [BR:
strk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
R2B38_09175 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
strk01011
]
Precursor biosynthesis
Amino acid ligase
R2B38_09175 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox
AlaDh_PNT_C
His_biosynth
Pyr_redox_2
LPD22
Mur_ligase
2-Hacid_dh_C
CbiA
Motif
Other DBs
NCBI-ProteinID:
WOX09048
LinkDB
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Position
complement(2135026..2136459)
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AA seq
477 aa
AA seq
DB search
MGSGKVTDGQGLSFEGKHVTVAGLGVSGIPAAKVLHGLGALVTVVNDGDDERSRAQAADL
EALGITVRLGDGATLPDGTGLIVTTPGWQPDKPLFTAAREAGVPVWGDVELAWRLRGPDA
APWLAVTGTNGKTTTVQMLASILKAADLRTAAVGNIGVSVLDAVLGDEEYDVLAVELSSY
QLHWAPSLRAHSAAVLNLAPDHLDWHGSMEAYAADKGRIYEGNRVACVYNVADKATEDLV
READVEEGCRAIGFTLGSPAPSQLGVVDGILVDRAFVEDRQKNAQELAEVSDVNPPAPHN
IANALAAAALARAFGVPAKAVRDGLRAFTPDAHRIAHVADVDGVAYIDDSKATNTHAAEA
SLAAYESIVWIAGGLAKGATFDELVAKSAKHLRGVVLIGADRALIREALARHAPEVPVVD
LDRTDTGAMLAAVQEAQRLAAAGDTVLLAPACASMDMFANYNKRGDAFAQAVRELGA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcggaaaagtgaccgacggtcagggtctctccttcgagggcaagcacgtcacc
gtcgccgggctcggtgtctccggcatcccggcggccaaggtcctgcacggcctcggcgcg
ctcgtcacagtcgtgaacgacggcgacgacgagcgctcccgggcccaggcggccgacctg
gaggcgctcggcatcaccgtgcgcctcggcgacggggcgaccctgcccgacggcaccgga
ctgatcgtcaccacccccggctggcagcccgacaagccgctgttcacggcggcgcgtgag
gcgggcgttccggtgtggggggacgtggagctggcgtggcgcctgcgcggccctgatgcg
gccccctggctcgccgtcaccggcaccaacggcaagaccaccaccgtccagatgctcgcc
tcgatcctgaaggctgcggacctgcgcacggcggcggtcggcaacatcggcgtctcggtc
ctggacgccgtactcggggacgaggaatacgacgtcctcgccgtggaactgtcgagctat
cagctccactgggcgccctcgctgcgcgcccactccgccgccgttctcaacctggcgccc
gatcatctcgactggcacggctcgatggaggcgtacgccgccgacaagggccgtatctac
gaaggcaatcgggtcgcctgcgtctacaacgtcgccgacaaggccaccgaggacctcgtc
cgcgaggccgatgtcgaggaggggtgccgggcgatcggcttcaccctcggcagtcccgcg
ccgtcccaactcggcgtcgtggacggcattctggtggaccgtgccttcgtcgaggaccgg
cagaagaacgcgcaggagctggcggaggtctccgacgtcaacccgcccgccccgcacaac
atcgccaacgcccttgccgcagctgccctcgcgcgcgccttcggggtgcccgccaaggcc
gtacgggacgggctgcgggccttcacgcccgacgcgcaccgcatcgcgcacgtggcggat
gtggacggtgtcgcgtacatcgacgactccaaggccaccaacacccatgcggcggaagcc
tcgttggcggcctacgagtcgatcgtgtggatcgcgggcggcctcgccaagggcgcgacc
ttcgacgaactcgtcgccaagtcggccaagcaccttcggggcgtggtgctgatcggcgcc
gatcgcgcgctgatccgcgaagccctggcgcgacacgcgccggaagtacccgtcgtcgac
ctcgaccggaccgacactggggcgatgctcgcggctgtccaggaggcacagcggctcgcc
gccgccggcgacacggtgctgctcgccccggcctgcgcctccatggacatgttcgccaac
tacaacaagcgcggtgacgcgttcgcccaggcggttcgcgaactcggcgcctga
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