Streptomyces sp. N50: R2B38_13460
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Entry
R2B38_13460 CDS
T11501
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
K10440
ribose transport system permease protein
Organism
strk Streptomyces sp. N50
Pathway
strk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
R2B38_13460
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
R2B38_13460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
strk02000
]
R2B38_13460
Transporters [BR:
strk02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
R2B38_13460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
BPD_transp_2
Peripla_BP_1
Peripla_BP_3
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
WOX09811
LinkDB
All DBs
Position
3083283..3085235
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AA seq
650 aa
AA seq
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MATDTHLSTPGASGVSGIRRLLLDNGALTALIVLVIAMSALSGDFLTTDNLLNVGVQAAV
TAILAFGVTFVIVSAGIDLSVGSVAALSATVLAWSATQHGVPVFLAVVLAIATGIAAGLV
NGFLIAYGKLPPFIATLAMLSVARGLSLVISQGSPIAFPDSVSHLGDTLGGWLPVPVLVM
IVMGLIAAFVLGRTYIGRSMYAIGGNEEAARLSGLRVSKQKLAIYALSGVFAAAAGIVLA
SRLSSAQPQAADGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSA
FWQQVVIGVVIALAVLLDTVRRKAGATPASGTGGGIGGKGKQATTYALAAVVTIAIVGAT
SFLHNDSSTSSKPKLGLSLSTLNNPFFVQIRSGAQAEAKKLGLDLTVTDAQNDASQQANQ
LQNFTSSNYGAIIVNPVDSDAASNSVKAADKAKIPVIAVDRGVNKAAVDTLVASDNVVGG
ELAAKTVAEKLGGTGKIVILQGQAGTSAARERAEGFAKGLKAFPGIQVVAQQPADFDRTK
GLDVMSNLLQAHPDVQGVIAANDEMALGAIKALGSKAGKSVSVVGFDGTPDGLTAVKQGT
LYASVAQQPSQLGRIAVDNALRAAQGKKVETTVKVPVKVVTKENVAGFTG
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtggccactgacacgcatctgagcacgccgggcgcgagtggcgtctcggggatccgccga
ctgctcctggacaacggcgcgttgaccgcgctcatcgtcctggtcatcgccatgtcggcg
ctgtccggcgacttcctgaccaccgacaacctcctcaacgtcggtgtccaggcggccgtg
accgccatcctcgccttcggcgtcaccttcgtgatcgtctcggcgggcatcgacctgtcg
gtcggttcggtggccgccctgtccgccaccgtcctcgcctggagcgccacgcagcacggc
gtcccggtcttcctcgccgtcgtcctcgcgatcgccacgggtatcgcggccggtctcgtc
aacggcttcctcatcgcttacggcaaactcccgccgttcatcgcgacgttggcgatgctg
tcggtggcgcgcggtctgtcgctggtgatctcgcagggttccccgatcgccttcccggac
tcggtctcgcacctcggtgacacgctcggcgggtggctgccggtgccggtcctcgtgatg
atcgtgatggggctcatcgcggccttcgtcctcgggcggacgtacatcggccggtccatg
tacgcgatcggcggcaacgaagaggccgcgcggctctcggggttgcgcgtctccaagcag
aagctcgcgatctacgccctgtccggcgtcttcgccgccgccgcgggcatcgtcctcgcc
tcccggctctcctccgcgcagccgcaggcggccgacggttacgagctggacgcgatcgcg
gcggtcgtcatcggcggcgcctccctcgcgggcggcaccggcaaggcgtccggcaccctc
atcggcgcgctgatcctcgcggtgctgcgcaacggcctcaacctcctttccgtgtccgcc
ttttggcagcaggtcgtcatcggtgtcgtgatcgcgctggccgtcctgctggacaccgtg
cgccgcaaggcgggggcaactcccgcctccggtacgggcggtggcatcggcggaaagggc
aagcaggcgaccacgtacgcgctcgcggccgtcgtcaccatcgcgatcgtcggcgcgacc
tccttcctgcacaacgactcctcgacctcgtccaagcccaagctcgggctgtcgctctcc
acgctcaacaacccgttcttcgtgcagatccggtcgggcgcgcaggccgaggcgaagaag
ctgggtctggacctgaccgtcacggacgcgcagaacgacgcctcgcagcaggccaaccag
ctccagaacttcaccagttcgaactacggcgcgatcatcgtcaacccggtggactcggac
gcggcgagcaactccgtgaaggccgccgacaaggcgaagatcccggtcatcgccgtcgac
cggggcgtcaacaaggcggccgtggacacgctcgtcgcctccgacaacgtcgtgggcggt
gaactcgccgccaagaccgtcgccgagaagctgggcggcaccggcaagatcgtcatcctc
cagggccaggcgggcacttcggcggcgcgtgagcgggcggagggcttcgccaaggggctg
aaggccttccccggcatccaggtcgtcgcccagcagccggccgacttcgaccgcaccaag
ggcctcgacgtgatgtcgaacctgctccaggcgcaccccgacgtccagggcgtcatcgcc
gccaacgacgagatggccctcggcgcgatcaaggcgctcggctccaaggcagggaagtcg
gtctcggtcgtgggcttcgacggcacgccggacggcctgaccgccgtcaagcagggcacg
ctgtacgcgtccgtggcgcaacagcccagccagctcggcagaattgccgtggacaacgcg
ctgcgcgccgctcagggcaagaaggtggagacgacggtgaaggtgcccgtgaaggtggtc
accaaggagaacgtggccgggttcaccggctga
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