Streptomyces sp. N50: R2B38_22360
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Entry
R2B38_22360 CDS
T11501
Symbol
tmk
Name
(GenBank) dTMP kinase
KO
K00943
dTMP kinase [EC:
2.7.4.9
]
Organism
strk Streptomyces sp. N50
Pathway
strk00240
Pyrimidine metabolism
strk01100
Metabolic pathways
strk01232
Nucleotide metabolism
Module
strk_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
R2B38_22360 (tmk)
Enzymes [BR:
strk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.9 dTMP kinase
R2B38_22360 (tmk)
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Motif
Pfam:
Thymidylate_kin
MFS_1
AAA_22
Serglycin
DUF5401
DUF973
Motif
Other DBs
NCBI-ProteinID:
WOX11399
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Position
5010567..5013887
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AA seq
1106 aa
AA seq
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MTPAEQPTAHQPAPDDALVADSRERAVRALLRQPQLKRLWSAQLVTGVGDTLALLVLVVL
AFQAAIAQGSFGGGYRGVAFAVATVFGARILATLLFGAVLLGPLTSLTSQEGPLDRRWTM
VGADGLRAALLIVAPLWIDWTPDNALAVLLVTAFVTGVAERFWTVCRESAGPALLPAPPL
EGATVRPLPDHMDALRRLSLRTSFVTIPLAAAALVVAALLNNLLGTGVAWFDQHQAALGS
YVAAGLFAASLSVLTALELPGIRTPRARSPLEGLRRPRTGTGVDKGRTGAIALLVVACAA
VAGAISAAVAVSVLQAQDLHGGPVTFGLLVLGLTGGVVVGIRTAPALLPTLSRRRLLTLA
IAFTGIALLAAGLVPDLTTVLLIVALAGIGAGVAANTGHTLLDQEAEDYRRARTTEHLHA
VVRVAVALGALIAPLVAALIGPHRLENGKFVFAHGGAAFTLMLVGALLLPVAALVLAKVD
DRAGVPLRHDLRDALLGGDDPDTVPASTGFFIALEGGDGAGKSTQAEALAEWIRGKGHEV
VLTREPGATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAVVVS
DRYIDSSVAYQGAGRDLSPTEIARINRWATDGLVPHMTVLLDVDPETARERFTEAPDRLE
SEPAEFHARVRSGFLTLAAADPSRYLVVDAGQEPEAVTTVIRHRLDTVLPLSEAEIKAQE
EARKAAEEEARRKAEEEAARKAEEERLERERQEQLAQLRAEEEERKRRELEEAQRREAER
QAEEARQRAEDARRRAEEEKARLLAEEEARAAEEARRRAEADRLRRQAEDEARLRAEAEA
RRLEKQRKAEAALLAAEEARRLAAEAAAAAERAARQPTAPVTPAAPEPRPEASTVPTPVV
KPGSGAGAGARGRSAEDTAVLRPVSSGSDSGSGSGSGSGSGSGDETAVLRSVSGDSEASG
SEVRDSERTAELPQPPAPAGAADETAVLPPVSAAEETAVLPPVGAAEETAVLPPVRDQES
SDRVPAGFFRDERPAGQGDGEDRTRELPQVDEQGAPRRRPRPDWAEETPLDDLPSLADEL
LGPREDGDFGRDDDGTGRGRGRGRRG
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagccgagcagccaacggcccaccagccggcccccgacgacgcccttgtcgcg
gactcccgcgagcgtgccgtccgcgccctgctgcgccagccgcagctcaagcggttgtgg
agcgcacagctcgtgacgggtgtcggtgacaccctcgccctgctggtcctggtcgtgctc
gccttccaggcggccatcgcccagggctcgttcggcggtggttaccggggtgtggcgttc
gcggtggcgaccgtcttcggggcgcgcatcctggcgacgctgctcttcggggcggtgctg
ctcggcccgctcacgtcgctcacctcccaggaggggccgctcgaccggcgctggaccatg
gtcggcgcggacggtctgcgggccgcgctgctgatcgtcgcccccctgtggatcgactgg
actccggacaacgcactggcggtgctcctggtgaccgccttcgtcaccggggtcgccgag
cgcttctggacggtgtgccgcgagagcgccgggcccgccctgctgcccgccccgccgctg
gagggcgccacggtccggccgctgcccgaccacatggacgcgctgcgccggctgtcgctg
cgcacgagcttcgtgaccatccccctcgcggccgccgccctcgtcgtggcggccctgctc
aacaacctgctgggcacgggcgtcgcctggttcgaccagcaccaggccgcgctcggttcg
tacgtcgcggccgggctgttcgccgcgtccctctccgtgctgaccgccctggaactgccc
ggaatccgcaccccgcgcgcgcggtcgccgctcgaaggcctgcgccgccccaggacgggc
accggcgtcgacaagggccgtacgggcgcgatcgcgctgctcgtggtcgcctgcgcggcc
gtcgccggggcgatctccgccgccgtcgcggtgtccgtgctccaggcccaggatctgcac
ggcggcccggtgaccttcgggctgctggtcctcgggttgaccggcggggtcgtggtcggc
atccgtacggcgcccgccctgctgccgacgctgtcgcgccgccgcctgctgacgctcgcc
atcgccttcaccggcatcgcgctgctcgccgcgggcctggtcccggacctcaccaccgtg
ctgctgatcgtcgcgctcgccggcatcggcgcgggcgtggccgccaacaccgggcacacc
ctcctcgaccaggaggccgaggactaccgccgggcgcgtacgaccgagcacctgcacgcg
gtcgtccgggtcgcggtggcgctcggcgcgctgatcgcccccctggtggcggcgctgatc
ggcccgcaccgcctggagaacggcaagttcgtgttcgcgcacggcggtgccgcgttcacg
ctgatgctggtcggcgccctgctgctgccggtcgccgcgctggtcctggccaaggtcgac
gaccgcgccggagtgccgctgcggcacgacctgcgggacgcgctgctcggcggcgacgac
cccgacacggtgcccgcgagcaccggcttcttcatcgccctggagggcggcgacggcgcc
gggaagtccacccaggccgaggccctcgccgagtggatcaggggcaagggacacgaggtc
gtgctgacccgcgagcccggcgcgaccccggtcggcaagcggctgcggtcgatcctgctc
gacgtgtcgtcggcgggactgtcccaccgcgcggaggcgctgctctacgccgccgaccgc
gcggagcacgtcgacaccgtcgtacggccggctctggagcgcggcgcggtcgtcgtctcc
gaccgctacatcgactcctccgtcgcctaccagggcgccggccgggacctgtccccgacc
gagatcgcccgcatcaaccgctgggccacggacggactcgtcccgcacatgaccgttctg
ctggacgtggacccggagaccgcccgcgagcggttcaccgaggcgccggaccgactggag
tcggagcccgccgagttccacgcgcgcgtacggtccggtttcctcacgctggccgccgcc
gacccgagccgctacctggtggtcgacgcgggtcaggagcccgaagccgtcaccacggtg
atcaggcaccgcctcgacaccgtcctgccgctctccgaggccgagatcaaggcccaggag
gaagcgcgcaaggccgccgaggaggaggcccgccgcaaggccgaggaagaggccgcgcgg
aaggccgaggaggagcgcctggagcgcgagcgccaggagcagctcgcccagctgcgcgcc
gaggaggaggagcgcaagcggcgcgagctggaggaggcccagcgccgcgaggccgaacgc
caggcggaagaggcccggcagcgcgccgaggacgcacgcaggcgtgccgaggaggagaag
gcccgcctcctcgccgaggaggaggcccgcgccgccgaggaggcccgccgcagggcggag
gccgaccggttgcgccggcaggccgaggacgaggcccggctgcgcgccgaggcggaggca
cggcgactggagaagcagcgcaaggccgaggcggccctgctcgcggccgaggaggcccgc
cgcctggcggcggaggcggcggccgcagcggagcgggcggctcgacagccgacggctcct
gtgactcctgcggctccggagcccaggcctgaggcgtcgaccgtgccgacgccggtggtg
aagccgggttcgggcgcgggtgccggtgcgcgtgggcggtcggcggaggacacggctgtg
ctgcggccggtgagttccggctccgattcaggatccggttctggttcaggttctggttct
ggttccggggacgagacggccgtactgcggtcggtgtccggggactccgaggcgtccggt
tccgaggtgcgcgactccgagcggacggccgagctgccgcagccgcccgctcctgccggg
gccgcggacgagacggccgtactgcccccggtgtccgctgccgaggagacggcggtgctg
ccgccggtcggtgctgcggaggagaccgcggtgctgccgccggtgcgcgaccaggagtcg
tcggaccgggtgcccgcgggcttcttccgggacgagcgtccggccggtcagggcgacggc
gaggaccgtacccgcgagctgccccaggtcgacgagcagggtgcgccccggcgccggccg
cgtcccgactgggccgaggagactccgctggacgacctgccctcgctggccgacgaactg
ctcggcccgcgcgaggacggcgacttcggccgggacgatgacggcaccgggcggggacgt
ggccgggggcgcaggggctga
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