Streptomyces sp. N50: R2B38_23080
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Entry
R2B38_23080 CDS
T11501
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
strk Streptomyces sp. N50
Pathway
strk00250
Alanine, aspartate and glutamate metabolism
strk00410
beta-Alanine metabolism
strk00430
Taurine and hypotaurine metabolism
strk00650
Butanoate metabolism
strk01100
Metabolic pathways
strk01110
Biosynthesis of secondary metabolites
strk01120
Microbial metabolism in diverse environments
strk02024
Quorum sensing
Module
strk_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
R2B38_23080
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
R2B38_23080
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
R2B38_23080
00430 Taurine and hypotaurine metabolism
R2B38_23080
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
R2B38_23080
Enzymes [BR:
strk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
R2B38_23080
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Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
WOX11536
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Position
complement(5148605..5150011)
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AA seq
468 aa
AA seq
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MPLHKGPDPSAERPMSVNPFYGEANPVGGMSEAPPKHRLPDTPLPPMTATQLVHDELMLD
GNSRLNLATFVTTWMEPEAGVLMAECRDKNMIDKDEYPRTAELEKRCVAMLADLWHAPDP
STAVGCSTTGSSEACMLAGMALKRRWTQRNKDRYPAARPNLVMGVNVQVCWEKFCNFWEV
EARQVPMEGDRFHLDPQAAADLCDENTIGVVGILGSTFDGSYEPIADLCAALDALQERTG
LDIPVHVDGASGAMVAPFLDPDLIWDFRLPRVASINTSGHKYGLVYPGVGWALWRDKEAL
PEELVFRVNYLGGDMPTFALNFSRPGAQVVAQYYTFLRLGREGYRAVQQSTRDVAQGLAQ
RIEALGDFKLLTHGNELPVFAFTTAPHIQTYDVFDVSRRLRENGWLVPAYTFPANREDLS
VLRVVCRNGFSADLAELFLDDLTRLLPELRRQPHPFTRDKQAATGFHH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgcacaaaggtcccgacccgtccgccgagcgccccatgtccgtgaaccccttc
tacggggaggccaatccggtcggcggcatgtccgaggccccgcccaagcaccggctcccg
gacaccccgctgcccccgatgacggcgacccagctcgtgcacgacgagctgatgctggac
ggcaactcccgcctgaacctggcgactttcgtcaccacctggatggagccggaagccggc
gtcctcatggcggagtgccgggacaagaacatgatcgacaaggacgagtacccccgcacc
gcagagctggagaagcgctgcgtggcgatgctcgcggacctctggcacgcaccggacccg
tcaaccgccgtcggctgctcgacaaccggctccagcgaggcctgcatgctcgccggcatg
gccctgaagcgccgctggacacagcgcaacaaggaccgctacccggcggcccgcccgaac
ctggtgatgggcgtcaacgtccaggtctgctgggagaagttctgcaacttctgggaggtc
gaggcccgccaagtccccatggagggcgaccgcttccacctggacccccaagcagcggcc
gacctctgcgacgagaacacgatcggcgtcgtaggcatcctgggctccacgttcgacggc
tcctacgaaccgatcgccgacctctgcgcagccctcgacgcactccaggagcgcacgggc
ctggacatcccggtccacgtggacggcgcgtccggcgccatggtcgcccccttcctggac
ccggacctgatctgggacttccgcctcccacgcgtggcgtcgatcaacacctcgggccac
aagtacggcctggtctacccgggcgtcggctgggccctgtggcgcgacaaggaggccctc
cccgaggaactcgtcttccgcgtcaactacttgggcggcgacatgcccaccttcgccctc
aacttctcccgccccggcgcccaagtagtagcccagtactacacattcctccgcctcggc
cgagagggctaccgcgcggtccaacagtccaccagggacgtagcccaaggcctggcacaa
cgcatcgaagccctaggcgacttcaaactcctcacccacggcaacgagttgccggtcttc
gccttcaccacagccccccacatccagacctacgacgtcttcgacgtctcccgccgcctc
cgggagaacggctggctggtcccggcgtacaccttcccggccaaccgcgaggacctctcc
gtcctccgagtcgtctgccgcaacggcttctcggcagacctcgccgaactgttcctcgac
gacctgacccgcctcctccccgaactacgccgccagccccaccccttcacccgcgacaag
caagcggcaacaggcttccaccactga
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