Streptomyces sp. N50: R2B38_25195
Help
Entry
R2B38_25195 CDS
T11501
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
strk Streptomyces sp. N50
Pathway
strk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R2B38_25195 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strk03019
]
R2B38_25195 (groL)
03110 Chaperones and folding catalysts [BR:
strk03110
]
R2B38_25195 (groL)
03029 Mitochondrial biogenesis [BR:
strk03029
]
R2B38_25195 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
strk04147
]
R2B38_25195 (groL)
Enzymes [BR:
strk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
R2B38_25195 (groL)
Messenger RNA biogenesis [BR:
strk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
R2B38_25195 (groL)
Chaperones and folding catalysts [BR:
strk03110
]
Heat shock proteins
HSP60 / Chaperonin
R2B38_25195 (groL)
Mitochondrial biogenesis [BR:
strk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
R2B38_25195 (groL)
Exosome [BR:
strk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R2B38_25195 (groL)
Exosomal proteins of other body fluids (saliva and urine)
R2B38_25195 (groL)
Exosomal proteins of breast cancer cells
R2B38_25195 (groL)
Exosomal proteins of colorectal cancer cells
R2B38_25195 (groL)
Exosomal proteins of bladder cancer cells
R2B38_25195 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WOX11929
LinkDB
All DBs
Position
5575092..5576717
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
LEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAISDELLATARPIDDKADIAAVAGLSAQDSQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLEDPYILIHQGKISSIQDLLPLLEKVIQ
ANASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDLATLTGGQV
IAEEVGLKLDQVGLDVLGSARRVTVTKDDTTVVDGAGDSSEVAGRVNQIKAEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAAKVLEGNLDKTGDEATGVAVVRRAVVEPLRWIAENAGLEGYVITAKVADLEPGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEPAAGGHSHGHS
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggcgtcaccatcgcccgcgaggtcgag
ctcgaggacccgtacgagaacctcggtgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgctcgtacgc
gagggcctgcgcaacgtcgccgcgggtgcctccccggccgccctgaagaagggcatcgac
gccgccgtcaaggccatctccgacgagctgctcgccaccgcgcggccgatcgacgacaag
gccgacatcgccgccgtggccggtctgtccgcgcaggacagccaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtgacggaccaggagcgcatggaagcggtcctcgaggacccgtacatcctcatc
caccagggcaagatcagctccatccaggacctgctgccgctgctggagaaggtcatccag
gccaacgcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtcgtgaacaagatccgcggcacgttcaacgcggtcgcggtcaaggcccccggc
ttcggcgaccgccgcaaggcgatgctcggcgacctcgccaccctcaccggcggtcaggtc
atcgccgaggaggtcggcctcaagctcgaccaggtcggcctggacgtgctgggctccgcc
cgccgcgtgacggtcaccaaggacgacacgaccgtcgtcgacggtgccggcgactcctcc
gaggtcgcgggccgcgtcaaccagatcaaggccgagatcgagaacacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctcaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgctctggtg
cacgccgccaaggtgcttgagggcaacctcgacaagaccggcgacgaggccaccggtgtc
gcggtcgtgcgccgcgcggtcgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctatgtcatcaccgccaaggtcgccgacctggagcccggccagggcttcaacgcc
gcgaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctgctcctcacgaccgagaccctg
gtcgtcgagaagaaggaagaggaggagccggccgccggtggtcacagccacggccactcc
cactga
DBGET
integrated database retrieval system
