Streptomyces sp. N50: R2B38_25400
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Entry
R2B38_25400 CDS
T11501
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
strk Streptomyces sp. N50
Pathway
strk03420
Nucleotide excision repair
strk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R2B38_25400 (pcrA)
03430 Mismatch repair
R2B38_25400 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strk03400
]
R2B38_25400 (pcrA)
Enzymes [BR:
strk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R2B38_25400 (pcrA)
DNA repair and recombination proteins [BR:
strk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R2B38_25400 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
R2B38_25400 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
WOX11965
LinkDB
All DBs
Position
5628470..5630971
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AA seq
833 aa
AA seq
DB search
MSSLFDDSFLADLQGPRAHEGEPPPPPEDEHGPEPIPDDLFGGKFDVPASRDAHYRDGAP
RPVADPAALLDGLNENQRAAVVHSDTPLLIVAGAGSGKTRVLTHRIAYLLGERNVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTVAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVMVDEYQDTNHAQYALVREL
VGTSEHPVDVPPSEHDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPNATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNAGAGAQITGYVADTEHDEAQFVAEEIDRLT
DAGDAKASDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDAVPLRRILNVPKRGIGERAEAMIDALSQREKISFPQALKRVDEAYGMAARSTNAVKK
FNTLMEDLRTIVESGAGPATVLEAILERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQENSGGDGESETPVGLAAFLERVALVADSDQIPDEDEDGSGVITLMTLHTAKGLEFPVV
FLTGMEDGVFPHMRALGQAKELEEERRLAYVGITRARERLYLTRSSLRSAWGQPSYNPPS
RFLEEIPAAHVEWKRTGAMAAPPSTGPASGIASSLSSSRSRSSASGASGFATRRTSEKPV
VALAVGDRVTHDQFGLGTVVGVKGTGSNAEATVDFGEPKPKRLLLRYAPVEKL
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggatctccagggcccccgtgcccacgag
ggagagcccccgcccccgcccgaggacgagcacggaccggagccgattccggacgacctg
ttcggcgggaagttcgacgtgcccgcgagcagagacgcccactaccgggacggcgcccca
cgcccggtggccgacccggcggcgctcctggacgggctgaacgagaaccagcgcgcggcc
gtcgtccactccgacaccccgctgctcatcgtggccggcgccggctccggcaagacccgc
gtgctcacccaccgcatcgcctacctgctgggtgagcggaacgtacaccccgggcagatc
ctcgcgatcaccttcacgaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgccaacgcgatgtgggtgatgaccttccacagcgcgtgcgtccgcatc
ctgcgccgcgagtcgaagaagctcggcttcacgtcctcgttctcgatctacgacgccgcc
gactccaagcgcctcatggccctggtctgccgcgacctggacctcgacccgaagcgcttc
cccccgaagtccttcagcgccaagatctcgaacctgaagaacgagctgatcgacgaagag
gacttcgccgcccaggcggccgacggtttcgagaagaccgtcgcccaggcctacgcgatg
taccagtcgcggctgcgcgaggccaacgccctcgacttcgacgacctgatcatgacgacg
gtcaacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccgccac
gtcatggtcgacgagtaccaggacaccaaccacgcgcagtacgcgctggtgcgcgagctg
gtcggcacctccgagcacccggtcgacgtccctcccagtgaacacgacctcccgcccgcc
gagttgtgtgtcgtgggtgacgccgaccagtcgatctacgccttccgcggggcgacgatc
cgcaacatcctccagttcgaggaggactacccgaacgcgacgacgatcctcctggagcag
aactaccgctccacacagacgatcctgagcgcggccaacgcggtcatcgagcgcaacgag
tcccgccgccccaagaacctgtggaccaacgcgggcgcgggcgcgcagatcaccggctat
gtcgcggacacggagcacgacgaggcgcagttcgtcgccgaggagatagaccgtctcacc
gacgcgggcgacgcgaaggcctcagacgtcgccgtcttctaccggacgaacgcccagtcc
cgtgtcttcgaggagatcttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgggacgtcctggcctacctccgcgtcctggccaac
ccggaggacgcggtcccgctgcgccgcatcctcaacgtccccaagcgcggcatcggcgag
cgcgccgaggcgatgatcgacgccctctcgcagcgcgagaagatcagcttcccgcaggcg
ttgaagcgcgtcgacgaggcctacggcatggccgcgcggtcgacgaacgcggtcaagaag
ttcaacacgctgatggaggacctccggacgatcgtcgagtccggcgcgggcccggcgacg
gtcctggaggcgatcctcgaacgcaccggctacctcgccgagttgcaggcctccaccgac
ccgcaggacgagacccgcatcgagaacctccaggaactggccgccgtagccctggagttt
gagcaggagaacagtggcggggacggggagagcgagacgcccgtcgggctcgccgcgttc
ctggagcgggtggcgctagtcgccgactccgaccagatcccggacgaggacgaggacggt
tccggagtcatcacgctgatgaccctgcacaccgccaagggacttgagttcccggtcgtc
ttcctcaccggcatggaggacggcgtcttcccgcacatgcgcgccctcggccaggccaag
gagctggaggaggaacgccgtctcgcgtacgtgggcatcacgcgcgcgcgggaacgcctg
tatctcacccgctcgtcgctgcgcagcgcgtggggccagccgtcgtacaacccgccctcc
cgcttcctggaggagatcccggcggcgcacgtggagtggaagcggaccggcgcgatggcg
gctccgccgtcgacgggtccggcctcgggcatcgcgtcctcgctgtcctcgtcccgctcg
cgctcgtcggcgtcgggcgcctcgggcttcgccacccgcaggacctcggagaagccggtc
gtggcgctggccgtcggcgaccgggtcacgcacgaccagttcgggctcggcacggtggtc
ggcgtgaagggcacggggtcgaacgcggaggcgacggtcgacttcggggagcccaagccg
aagcggctgctgctgcggtacgcgccggtggaaaagctgtag
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