Streptomyces sp. N50: R2B38_28265
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Entry
R2B38_28265 CDS
T11501
Name
(GenBank) family 2 encapsulin nanocompartment cargo protein polyprenyl transferase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
strk Streptomyces sp. N50
Pathway
strk00900
Terpenoid backbone biosynthesis
strk00997
Biosynthesis of various other secondary metabolites
strk01100
Metabolic pathways
strk01110
Biosynthesis of secondary metabolites
Module
strk_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
R2B38_28265
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
R2B38_28265
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
strk01006
]
R2B38_28265
Enzymes [BR:
strk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
R2B38_28265
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
R2B38_28265
2.5.1.29 geranylgeranyl diphosphate synthase
R2B38_28265
Prenyltransferases [BR:
strk01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
R2B38_28265
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WOX12489
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All DBs
Position
6242919..6244154
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AA seq
411 aa
AA seq
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MTFQQLDAVFPPGRAGTPRSNATGRGAGVTVRGLSEGDPVAESRGESMAEFRTETKQHPD
GTQHPDRAQQPDGHEAAVILEGARTSVDPELRAAIDSLPGSMRRVALYHFGWEHADGTPA
AGNAGKAIRPALVLAAATALGGEQARAGALRAAAAVELVHNFTLLHDDVMDRDTTRRHRP
TAWTVFGDADAILAGDALQALALRLLAEDPHPASSAAAARLADCVVELCEGQHADTAMEK
RAPAEVTLDEVLTMAEAKTGALLGCACAVGALYAGASAEDVEALDAFGRQAGLAFQLIDD
VIGIWGDPGRTGKPAGADLAVRKKSLPVVAALTSGTPAAAELAELYGLPYEEGELERTAL
AVERAGGRDWAQDQAADRMARAVQELARAIPDPQDAGGLLALAEFVTRRSS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtttcagcagctggacgcggtgttcccgcccggaagggcgggtacaccccggtcg
aacgcgaccggccgcggcgcgggcgtcaccgtccgcggactctccgagggggaccccgtg
gccgagtcgaggggggagtccatggccgagttcaggacggagacgaaacagcaccccgac
gggacgcagcaccccgacagggcgcagcagcccgacgggcacgaggcggcggtgatcctg
gagggggccaggacgtccgtcgaccccgaactgcgcgcggcgatcgactcgttgcccggc
tcgatgcgcagggtcgcgctctaccacttcgggtgggagcacgcggacggcacaccggcg
gcgggcaacgcgggcaaggcgatccgccccgccctcgtcctcgccgccgccaccgcgctc
ggcggcgagcaggcgcgggcgggcgcgctgcgggccgcggcggcggtggagctggtccac
aacttcacgttgctgcacgacgacgtgatggaccgggacaccacccgccggcaccggccc
accgcgtggaccgtgttcggcgacgccgacgcgatcctcgccggggacgccctccaggcg
ctggccctgcggctgctcgccgaggacccgcacccggcgtcctcggccgccgcggcccgg
ctcgcggactgcgtcgtcgaactgtgcgagggccagcacgcggacaccgccatggagaag
cgggcccccgccgaggtcaccctcgacgaggtgctcaccatggccgaggccaagaccggc
gcgctgctcggctgcgcctgcgcggtgggcgcgctgtacgcgggggcgtccgccgaggac
gtcgaggcgctggacgcgttcggtcgccaggccgggctcgccttccagctgatcgacgac
gtcatcggcatatggggcgaccccggccgtacgggcaaaccggccggcgccgacctcgcc
gtccgcaagaagtccctgcccgtggtcgccgccctcacctcgggtacaccggcggccgcg
gaactcgcggaactgtacggactgccgtacgaggaaggggagttggagcgcaccgcgctc
gccgtggagcgggccggcggccgggactgggcgcaggaccaggcggccgaccggatggcg
cgggccgtgcaggagctggcccgggcgatcccggacccgcaggacgcgggcggtctgctc
gcgctggccgagttcgtgacgcggcgcagcagttga
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