KEGG   Streptomyces sp. N50: R2B38_30220
Entry
R2B38_30220       CDS       T11501                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
strk  Streptomyces sp. N50
Brite
KEGG Orthology (KO) [BR:strk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:strk03032]
    R2B38_30220
   03036 Chromosome and associated proteins [BR:strk03036]
    R2B38_30220
   03400 DNA repair and recombination proteins [BR:strk03400]
    R2B38_30220
DNA replication proteins [BR:strk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    R2B38_30220
Chromosome and associated proteins [BR:strk03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    R2B38_30220
DNA repair and recombination proteins [BR:strk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      R2B38_30220
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: WOX12838
LinkDB
Position
6672482..6673105
AA seq 207 aa
MNKAQLVEAIADKVGGRQQAAEAVDAVLDAVVRAVVNGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLSGTASATVKK
AAAKKTTAKRATAAAKKTVAKKTVAKKTTATAKKATAKKATAKKTTATAKKTAAKKATGT
AKKATAKKAPAKKSATRKTTAKKATTR
NT seq 624 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgcggacaaggtcggtggccgtcagcaggcc
gccgaggcggtcgacgcggttctggacgcagtcgtccgtgccgtcgtcaatggggaccgg
gtttcggtcaccggcttcggttcgttcgagaaggtcgaccgtccggcccgttacgcccgc
aacccccagacgggcgagcgggttcgggtcaagaagacctccgtgccgcgcttccgcgcg
ggccagggtttcaaggacctggtgagcggctcgaagaagctcccgcgcggcggcgaggtc
gccgtcaagaaggcgcccaagggcagcctgagcggcaccgcttcggcgacggtcaagaag
gccgcggccaagaagaccaccgccaagagggcgaccgccgccgcgaagaagaccgtggcg
aagaagacggtcgccaagaagaccacggccacggccaagaaggccacggccaagaaggcg
accgccaagaagaccacggcgacggccaagaagacggcggccaagaaggccaccggcacc
gccaagaaggcgacggccaagaaggcccccgccaagaagtcggcgacgcgcaagaccacc
gccaagaaggccaccacccgctag

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