Streptomyces sp. N50: R2B38_30220
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Entry
R2B38_30220 CDS
T11501
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
strk Streptomyces sp. N50
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strk03032
]
R2B38_30220
03036 Chromosome and associated proteins [BR:
strk03036
]
R2B38_30220
03400 DNA repair and recombination proteins [BR:
strk03400
]
R2B38_30220
DNA replication proteins [BR:
strk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
R2B38_30220
Chromosome and associated proteins [BR:
strk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
R2B38_30220
DNA repair and recombination proteins [BR:
strk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
R2B38_30220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
WOX12838
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All DBs
Position
6672482..6673105
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AA seq
207 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAAEAVDAVLDAVVRAVVNGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLSGTASATVKK
AAAKKTTAKRATAAAKKTVAKKTVAKKTTATAKKATAKKATAKKTTATAKKTAAKKATGT
AKKATAKKAPAKKSATRKTTAKKATTR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgcggacaaggtcggtggccgtcagcaggcc
gccgaggcggtcgacgcggttctggacgcagtcgtccgtgccgtcgtcaatggggaccgg
gtttcggtcaccggcttcggttcgttcgagaaggtcgaccgtccggcccgttacgcccgc
aacccccagacgggcgagcgggttcgggtcaagaagacctccgtgccgcgcttccgcgcg
ggccagggtttcaaggacctggtgagcggctcgaagaagctcccgcgcggcggcgaggtc
gccgtcaagaaggcgcccaagggcagcctgagcggcaccgcttcggcgacggtcaagaag
gccgcggccaagaagaccaccgccaagagggcgaccgccgccgcgaagaagaccgtggcg
aagaagacggtcgccaagaagaccacggccacggccaagaaggccacggccaagaaggcg
accgccaagaagaccacggcgacggccaagaagacggcggccaagaaggccaccggcacc
gccaagaaggcgacggccaagaaggcccccgccaagaagtcggcgacgcgcaagaccacc
gccaagaaggccaccacccgctag
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