Streptomyces sp. N50: R2B38_30760
Help
Entry
R2B38_30760 CDS
T11501
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
strk Streptomyces sp. N50
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Collagen
HTH_AsnC-type
MarR_2
HTH_24
Sigma70_r4
DUF6459
HTH_Crp_2
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
WOX12938
LinkDB
All DBs
Position
6785205..6787286
Genome browser
AA seq
693 aa
AA seq
DB search
MDGRQWRSTIAAAQAGDRRALDELVAGWLPLVYNVVGRALNGHADVDDVVQETMLRAVDH
LGSLRDPDSFRSWLVAIAMRQIRDRARRRKSPDQLPDGLPGDAADFAELTVLRLQLEGQR
REVAEAVRWLDDEDRQLLSLWWLEVGGELTRRELASALGISRQHAAVRVQRMKERLETAR
GVVRALDGACPDLRDLTARWDGRRDSVWRKRLARHLRGCAYCGDPRESVVPAERLLVGIA
LVPLPLGFTLSLAFGAKTAAAAAGVAGAAFGVGASGVGGVAGAGGVTGAAGFAGSVGASG
VAGSAGAAGVAGAAGAVGSAGAVGSAGAVGAAGSVGSAGAAGTVGAAGASGIGGAAGAAG
ASGVGGSAGAAGASGVAGSAGASGAAGSAGVAGSAGAPAGWSAKLLGVLTKPAVAVAAGA
TIAAGGVYVVTQSPNDPPPKALTPTAAATAPGPGTGTPTTVPPSRSASASVSPSASPSPS
KTATGPYGSVVDAVDRAPDPSTPPAALPHRPASGVTSTGGAHATMNHRGDNVTLSGQGYV
LVRWQISPQYRNGALVMPSWTALKGKLFHVASGGGRRMDDPVSPTDTTATGMGSSTTGYD
VLPTGTQQMWQNEYFYVDGRVTLTVNERGADYGLNVFPTTWDAVEQDITTGPTQGATRYG
LTRDTGKDDAPVPQYVTRSTPADPATVAQESRV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcggcagtggcgctccaccatcgcggcggcgcaggccggtgaccggcgggca
ctggacgaactggtcgcgggctggctgccgttggtctacaacgtggtcggccgcgccctc
aacggccatgccgacgtggacgacgtggtccaggagacgatgctccgcgccgtcgaccac
ctcggctcgctccgcgaccccgacagcttccgctcctggctggtggcgatcgccatgcgc
cagatacgggaccgggcacgccgccggaagtcccccgaccaactgccggacgggctaccg
ggagacgccgccgacttcgccgaactcaccgtcctgcggctccagttggagggccagcgg
cgcgaggtcgcggaggcggtgcgttggctcgacgacgaggaccgccaactcctctccctg
tggtggctggaggtcgggggcgaactcacccgccgcgaactggcgtcggcgctcggcatc
agccgccagcacgcggcggtccgcgtccagcgcatgaaggaacgcctggagaccgcccgg
ggtgtcgtccgcgccctcgacggcgcctgccccgacctccgcgacctcaccgcccgctgg
gacggccgccgcgactcggtctggcgcaaacgcctggcccggcacctgcgcggctgcgcc
tactgcggcgacccccgcgagtccgtcgtaccggcggaacgcctcctcgtcggcatcgcc
ctcgtcccgctcccactcggcttcacgctgtcgctggccttcggggcgaagacggcggcg
gctgcggcgggggtcgccggggctgcctttggggttggggcgagtggggtgggcggggtt
gcgggtgccggtggggtgactggtgcggcggggttcgcgggctcggtgggtgcgtctggt
gttgccggttccgccggggcggccggggttgcgggtgctgcgggtgccgtcggttccgcg
ggcgcggtcggctcggcgggagccgtaggagcggcgggttccgtgggctcggcgggagcg
gccgggaccgtcggcgcggcgggagcttcaggcatcggaggggcggcaggggccgctggt
gcgtccggcgtcggaggttcggcaggggctgcgggcgcgtccggcgtcgcgggttcggcg
ggagcttccggagcggcaggctccgccggagtcgccggttcggccggtgctcccgccggc
tggtccgccaagctgctcggggtgctgaccaagccggccgtcgccgtggcggcgggcgcg
acgatagccgcgggcggcgtctacgtcgtcacccagtccccgaacgacccacccccgaag
gccctcacccccaccgccgcggccaccgcacccggccccggaaccggcaccccgacgacc
gtgcccccgtcacgatccgcgtccgcgtccgtgtccccgtctgcctccccctccccgtcg
aagacggccaccggcccctacggctcggtcgtcgacgccgtggaccgggcgccggacccc
agtaccccgcccgcggcgctcccgcaccgccccgcctccggcgtcaccagcaccggcggc
gcgcacgccacgatgaaccatcgcggggacaacgtgacgctcagcggccagggttacgtc
ctcgtccgctggcagatctcgccgcagtaccgcaacggcgcgctggtcatgccgagttgg
accgccctgaagggcaagctgttccacgtggcctcgggcggcggccgccgtatggacgac
ccggtcagccccaccgacaccaccgccaccggcatgggcagctccaccaccggctacgac
gtcctgcccaccggcacccaacagatgtggcagaacgagtacttctacgtcgacggcaga
gtcaccctcaccgtcaacgaacgcggcgccgactacggcctcaacgtcttccccaccacc
tgggacgccgtggagcaggacatcaccaccggccccacccagggcgcgacccgctacggc
ctgacccgcgacaccggaaaggacgacgccccggtaccccagtacgtcacccgcagtact
ccggccgacccggcgaccgtggctcaggagtcccgggtgtag
DBGET
integrated database retrieval system
