Streptomyces sp. N50: R2B38_30840
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Entry
R2B38_30840 CDS
T11501
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
strk Streptomyces sp. N50
Pathway
strk00250
Alanine, aspartate and glutamate metabolism
strk00280
Valine, leucine and isoleucine degradation
strk00310
Lysine degradation
strk00410
beta-Alanine metabolism
strk00640
Propanoate metabolism
strk00650
Butanoate metabolism
strk01100
Metabolic pathways
strk01120
Microbial metabolism in diverse environments
Module
strk_M00027
GABA (gamma-Aminobutyrate) shunt
strk_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
R2B38_30840 (gabT)
00650 Butanoate metabolism
R2B38_30840 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
R2B38_30840 (gabT)
00280 Valine, leucine and isoleucine degradation
R2B38_30840 (gabT)
00310 Lysine degradation
R2B38_30840 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
R2B38_30840 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
strk01007
]
R2B38_30840 (gabT)
Enzymes [BR:
strk01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
R2B38_30840 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
R2B38_30840 (gabT)
2.6.1.48 5-aminovalerate transaminase
R2B38_30840 (gabT)
Amino acid related enzymes [BR:
strk01007
]
Aminotransferase (transaminase)
Class III
R2B38_30840 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WOX12951
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Position
complement(6803742..6805076)
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AA seq
444 aa
AA seq
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MTAVPQERRVLTAIPGPKSQELQARRTAAVAAGVGSVLPVFTARAGGGIIEDVDGNRLID
FGSGIAVTSVGASAEAVVRRASAQLADFTHTCFMVTPYEGYVEVAEALAELTPGDHAKKS
ALFNSGAEAVENAVKIARAYTKRQAVVVFDHGYHGRTNLTMALTSKNMPYKNGFGPFAPE
VYRVPVAYGYRWPTGPDNAGAEASAQAIDMINKQIGADNVAAIIIEPVLGEGGFIEPAKG
FLPALSEFARANGIVFVADEIQSGFCRTGQWFACEDEGVVPDLITTAKGIAGGLPLAAVT
GRAEIMDAAHAGGLGGTYGGNPVACAGALGAIETMKELDLNAKAKNIESVMKVRLGAMAE
KFDIIGDVRGRGAMIAIELVKDRTTKEPNPEATAALAKACHQEGLLVLTCGTYGNVLRFL
PPLVIGEDLLSEGLDIIEQAFARI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgttccgcaggagcgccgcgttctcaccgccatccccggcccgaagtcgcag
gagctgcaggcccgccgtaccgccgcggtcgcggccggtgtgggctccgtgctgcccgtg
ttcaccgcgcgcgccggcggcgggatcatcgaggacgtcgacgggaaccggctcatcgac
ttcggttccggtatcgccgtgacgtccgtcggcgcctccgccgaggcagtcgtacgccgt
gcgagcgcgcagctcgccgacttcacccacacctgtttcatggtcacgccctacgagggc
tacgtcgaggtcgccgaggcgctcgccgagctgactccgggtgaccacgccaagaagtcg
gcgctgttcaactccggtgccgaagccgtcgagaacgccgtgaagatcgcccgggcctac
accaagcggcaggccgtcgtcgtgttcgaccacgggtaccacggccggaccaacctcacg
atggcgctgacctcgaagaacatgccgtacaagaacggcttcgggccgttcgcgcccgag
gtctaccgcgtcccggtcgcctacggctaccgctggccgaccggtccggacaacgccggt
gccgaggcctccgcgcaggccatcgacatgatcaacaagcagatcggcgccgacaacgtc
gccgcgatcatcatcgagcccgtcctcggcgagggcggtttcatcgagccggccaagggt
ttcctgcccgctctcagtgaattcgccagggccaatgggatcgtcttcgtcgccgacgag
atccagtccgggttctgccgtacgggtcagtggttcgcgtgtgaggacgagggtgtcgtc
ccggatctgatcacgaccgcgaaggggatcgccggcgggctgccgctcgccgccgtcacc
gggcgcgccgagatcatggacgccgcgcacgccgggggcctcggtggcacctacggcggc
aaccccgtcgcctgcgccggtgcgctcggcgccatcgagaccatgaaggagctggacctc
aacgccaaggccaagaacatcgagtcggtcatgaaggtccggctcggcgccatggcggag
aagttcgacatcatcggcgacgtgcgcgggcgcggcgcgatgatcgccatcgagctcgtc
aaggaccgtacgaccaaggagccgaacccggaggcgaccgccgcgctcgccaaggcgtgc
caccaggaggggctgctggtcctgacctgtggcacctacggcaacgtgctgcgcttcctg
cccccgctggtcatcggggaggatctgctgagcgaggggctcgacatcatcgagcaggcg
ttcgcacgtatctga
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