Streptomyces sp. N50: R2B38_34575
Help
Entry
R2B38_34575 CDS
T11501
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
strk Streptomyces sp. N50
Pathway
strk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R2B38_34575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
strk03000
]
R2B38_34575
03400 DNA repair and recombination proteins [BR:
strk03400
]
R2B38_34575
Enzymes [BR:
strk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
R2B38_34575
Transcription factors [BR:
strk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
R2B38_34575
DNA repair and recombination proteins [BR:
strk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R2B38_34575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WOX13640
LinkDB
All DBs
Position
7763784..7765262
Genome browser
AA seq
492 aa
AA seq
DB search
MQNGMHTDTERCVRAVQSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKPENMTFYPSAAA
CQQAGFRACKRCRPDTSPGSPEWNQRADLVARAMRLIADGTVDREGVPGLAARLGYSTRQ
IERQLLAELGAGPLALARAQRAQTARLLIETTALPMAEIAFAAGFSSIRTFNDTVRDVFA
LSPSELRNRRPKTTVLTPGTLTLRLPFRTPLNPDNLFGHLAATAVPGVEEWRAGAYRRTL
RLPYGHGIASLTPRTDHIACRLTLSDLRDLPVAISRCRRMLDLDADPVAVDDQLRTDPVL
APLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGERVDDPEGGLTH
LFPSVESLAAVDPESLAMPRTRRTTFTTLVAQLADGTLHLGVESDWTETRARLLSLPGFG
PWTADVIAMRALGDPDAFLPTDLGIRRAAQELGLPSTPAALTARAAAWRPWRAYAVQYLW
ATDSHPINFLPV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgggatgcacaccgacacggagcgttgcgtgcgcgcggtccagtccaaggac
gcgcgcttcgacggctggttcttcacggccgtcctgaccacccgcatctactgccgaccc
agctgcccggtcgttccgcccaagccggagaacatgacgttctacccgagcgcggcggcc
tgccagcaggcgggtttccgggcctgcaagcgctgccgcccggacaccagccccggctcc
ccggagtggaaccagcgggccgacctggtggcccgcgccatgcgcctgatcgccgacgga
accgtggaccgcgagggagttcccggcctcgccgcccgcctcggctacagcacccgccag
atcgaacgccagctcctcgccgaactgggagcgggccccttggccctggcccgcgcccaa
cgcgctcagacggcaaggctgttgatcgagacgaccgccctcccgatggcggagatcgcc
ttcgccgccggtttctcctcgatccgcaccttcaacgacaccgtgcgcgacgtcttcgcc
ctctccccgagcgagctgcgcaacaggcgcccgaagacgacggtgttgacccccggcacc
ctcaccctccgcctgccgttccgcacccccctcaaccccgacaacctcttcggccacctc
gcggcgaccgctgtaccaggcgtggaggagtggcgggccggcgcgtaccgccgcaccctc
cgcctcccctacgggcacggcatcgcgtccctgaccccccggaccgaccacatcgcctgc
cgcctcaccctcagcgacctgcgcgacctgccggtggcgatcagccgctgccgccgcatg
ctcgacctggacgccgatccggtcgcggtggacgaccagttgaggaccgacccggtgctg
gcaccgctggtggacaaggcgccgggccgccgcgtcccgcgcacggtcgacgaggcggag
ttcgccgtgcgggccgtcctcggccagcaggtctccacggcggcggcccgcacccacgcg
gcccgcctggtcaccgcgcacggcgaacgggtcgacgaccccgagggcggcctgacccac
ctcttcccgtcggtggagtcactggcggcggtggacccggaatcactggcgatgccgcgg
acgcgccgcaccacgttcaccaccctggtcgcccaactggccgacggcacgctccacttg
ggagtggagagcgactggacggaaacccgcgcccgactcctctcgctccccggcttcggc
ccctggacggccgacgtcatcgccatgcgcgccctcggcgaccccgacgccttcctcccc
accgacctcggaatccgccgcgccgcccaggagttgggcctcccgtcgaccccggcggcc
ctcaccgcacgcgcggcggcctggcggccctggcgggcgtacgcggtccagtacctgtgg
gcgacggacagccacccgatcaacttcctcccggtataa
DBGET
integrated database retrieval system
