Streptomyces sp. N50: R2B38_42840
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Entry
R2B38_42840 CDS
T11501
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
strk Streptomyces sp. N50
Brite
KEGG Orthology (KO) [BR:
strk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
R2B38_42840
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
WOX15179
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Position
9655659..9656858
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AA seq
399 aa
AA seq
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MTAIHAKRAFKYRFYPTDVQAAELSRTFGCVRKVYNLALAARSEAWTLRREQVTYNQTSA
MLTGWKKTEELAFLREVSSVPLQQTLRHVQTAFTHFFAKRAKYPRFKTRKKSRKSAEYTR
SGFRFRDGQLTLAKMTEPLDIVWSRALPEGAQLSTVNVSQDAAGRWFVSMLCDDPAIRPL
PATDKAVGIDVGLTHLLTLSTGEKVANPRHERRDRGRLVRAQRELSRKAKGEGTNRAKAR
RKVAKIHARIADRRRDLLHKLTTRLMRENQTLVIEDLTVRSMVKNHTLARAISDASWSEF
RSMLEYKAKWYGREVIAVDRFFPSSKLCSACGAVQERMPLDVRTWTCDCGTTHDRDVNAA
RNLLAAGLAVSVCGAGVRPQRSSPGGQLATKQKTPRREP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgattcacgcgaagcgggcgttcaagtaccgcttctatcccaccgatgtgcag
gcagccgagttgtcgcgcacgttcgggtgcgtgcggaaggtctacaacctggcgctcgct
gcccggagtgaggcgtggacgctgaggcgggaacaggtcacctacaaccagacctcggcc
atgctgaccggatggaagaagactgaggaactcgccttcctgagggaggtctcgtctgtt
ccgcttcagcagacactgcggcatgtgcagacggcgttcacccacttcttcgccaagcgg
gccaagtacccgcgcttcaagacgcggaagaagtcgcggaagtccgccgaatacacccgc
agcggcttccgtttccgggacggccagctgacgttggcgaagatgacggagccgctggac
atcgtctggtcgcgggcattgccggaaggagcccagctgtcgactgtgaacgtgtcgcag
gacgcggccggtcgctggttcgtctcgatgctgtgcgacgaccccgccatcaggccactt
cctgccactgataaggctgtcgggatcgatgtcggtcttacccatctgctgaccctctcc
acgggggagaaggtcgccaacccgcggcacgagcgccgtgaccgcggccgtctcgtgaga
gctcagcgggagctgtcgcgcaaggccaagggcgagggaaccaacagggccaaggcccgg
cgtaaggtcgcgaagatccacgcccgaatcgccgaccggcgccgcgatctgctccacaag
ttgaccactcgactcatgcgtgaaaaccaaacgctcgtgatcgaggacctgaccgtacgc
agcatggtcaaaaaccacacgctcgcccgggccatctccgacgcgagctggagcgagttc
cgctccatgctggagtacaaggcgaagtggtacgggcgcgaagtcatcgcggtggaccgc
ttcttcccctcctccaagctgtgctccgcctgcggtgctgtgcaggagagaatgccgctc
gatgttcgtacctggacatgcgactgcgggacgactcatgaccgggacgtgaacgcggca
cggaaccttttggccgccgggctggcggtgtctgtctgtggagctggtgtaagacctcaa
cggagttctccgggcgggcagttggcgacgaagcagaaaaccccacggcgcgagccgtag
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