Streptomyces sp. RLB1-33: HEP84_08260
Help
Entry
HEP84_08260 CDS
T10398
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
strl Streptomyces sp. RLB1-33
Pathway
strl03030
DNA replication
strl03430
Mismatch repair
strl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEP84_08260 (dnaE)
03430 Mismatch repair
HEP84_08260 (dnaE)
03440 Homologous recombination
HEP84_08260 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strl03032
]
HEP84_08260 (dnaE)
03400 DNA repair and recombination proteins [BR:
strl03400
]
HEP84_08260 (dnaE)
Enzymes [BR:
strl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEP84_08260 (dnaE)
DNA replication proteins [BR:
strl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEP84_08260 (dnaE)
DNA repair and recombination proteins [BR:
strl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEP84_08260 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QIY69190
UniProt:
A0A6H1L0M9
LinkDB
All DBs
Position
complement(1800737..1804330)
Genome browser
AA seq
1197 aa
AA seq
DB search
MTDSFVHLHNHTEYSMLDGAQKLKPMFAEVERQGMPAVAMSDHGNMFGAYEFHQVSKGVD
GVKPIIGIEAYVAPSSRRNRKQEFWGPGGQRAMSDDGEGSKDVSGGGRFTHMTMWAQNVQ
GLKNLFHLSTEASYTGQFPAGKPRMDMELISEQAGGIIATTGCPSGAIQTRLRLNQYDEA
REVAAAYQDIFGKESYFLELMDHGLSIEKDVRDGLLRLAKDLNIPLLATNDAHYVHEDQA
DAHDNLLCIGVGKNKDDPKRFRFQGSGYYLKTAAEMRELFAELPEACNNTLLIAERIESY
DSVFENVDEMPQYPDVPEGETQESWLRKECLKGLAMRYGDPIPAEVMERFETEMTVIGPM
GFSSYFLVVADICRHARDNKIPVGPGRGSATGSIVAYATRITELCPLEHGLLFERFLNPE
RINPPDVDLDFDDRQRDAMVRYVTEKYGDEYTAMVNTFGKIKAKNAIKDSSRILGYPFQH
GERITKALPPDIMGKSIPLDGIFDSAHPRYGEAGEIRTMYENEPEVKKVIDTAKGVEGLT
RGTGVHAAAVILSKTKLTERIPLHMRAKDGVKITGFDYPSCENMGLVKMDFLGLRNLGVI
DHALTNIRENRGVKLATVDPGNGDTSVTVIPLDDKKTFELLGRGDTFGVFQLDGGGMRAL
LKLMEPSRFEDIAAALALYRPGPMAANAHTNYALRQNGKQDPDPIHPELKEVLDPILGST
HHLLIFQEQIMAIARTLAGYTLGGADMLRRAMGKKKPEVLAAEWQKFHDGMADNDYSEES
IKAIWDVMLPFSGYAFNKSHTAGYGLVSYWTAYLKANYPAEYMAALLTSVGDDKDKAGIY
LADARKLGVTVLAPDVNESLAEFAAVGDDVRFGLLSVRNVGDNVIESIIAARKSKGKFTS
FSDFLDKVDLPALNKRAVESLIRSGAFDSLGHTRKGLSAAHESAIDAVVPLKKAAAYGQD
DLFAGLGDAASDDSFSLDVPVSDDEWPRKQLLSIEREMLGMYVSAHPLDGTEHILSTNRD
TTIVDLLASGRTEGVVRLSGLITSVQPKMTKQGNAWAIVNLADRDGTIEVLFFPATYQMV
AAALVEDSVITVQGRVNDRDGAISIFGQELKVLDVTSAERDGAAPVQLRLPYHRINELCI
NELKRIMGAHPGQNPVQLAVRGPQKTVVYQLPSLVNAATIASDIKGSFGPEAWQGVA
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
gtgacggattcctttgttcacctgcacaatcacaccgaatattcgatgctcgacggcgcg
cagaagctcaagccgatgttcgccgaggtcgagcgtcagggcatgccggccgtcgccatg
agcgaccacggcaacatgttcggtgcgtacgagttccatcaggtgtccaagggtgtcgac
ggcgtcaagccgatcatcgggatcgaggcctacgtcgcgccgtcctcgcgccggaatcgc
aagcaggagttctggggtccgggcggccagcgggcgatgtcggacgacggtgagggctcg
aaggacgtctccggcggtggccggttcacgcatatgacgatgtgggcgcagaacgtccag
ggtctgaagaacctcttccacctgtcgaccgaggccagctacaccggtcagttccccgcg
ggcaagccgcggatggacatggagctgatcagcgagcaggcaggcggcatcatcgccacg
acgggctgcccgtccggggcgatccagacgcggctgcggctgaaccagtacgacgaggcc
cgtgaagtcgctgccgcctaccaggacatcttcggcaaggagagttacttcctggagctg
atggaccatgggctgtccatcgagaaggacgtccgtgacgggctgttgcggctggccaag
gatctgaacattccgctgctggccacgaacgacgcgcactatgtgcacgaggaccaggcc
gatgcgcatgacaacctgctgtgtatcggggtgggcaagaacaaggacgacccgaagcgg
ttccggttccagggcagcggctattacctcaagaccgccgccgagatgcgggagttgttt
gcggagctgccggaggcctgcaacaacacccttctgatcgccgagcgcatcgagtcctac
gactccgtcttcgagaacgtcgacgagatgccgcagtacccggacgtgccggagggggag
acgcaggagtcctggctgcgcaaggaatgcctcaagggcctggccatgcgctacggcgac
ccgatcccggccgaggtcatggagcgcttcgagaccgagatgacggtcatcggccccatg
ggcttctcctcctacttcctcgtggtcgccgacatctgccgccacgcccgcgacaacaaa
atcccggtcgggcccggccgcgggtcggccaccggctcgatcgtcgcgtacgcgacccgc
atcaccgagctgtgcccgctcgagcacggcctgctcttcgaacgctttttgaaccctgag
cgcatcaacccgccggatgtcgacctcgacttcgacgaccgccagcgtgacgccatggtc
cgctacgtcaccgagaagtacggcgacgagtacaccgccatggtcaacaccttcggcaag
atcaaagccaagaacgcgatcaaggactcgtcccgcatcctcggctaccccttccagcac
ggcgagcgcatcaccaaggcgctcccgccggacatcatgggcaagtcgatcccgctggac
ggcatcttcgactccgcgcacccgcgctacggcgaggccggcgaaatccggacgatgtac
gagaacgagccggaggtgaagaaggtcatcgacaccgccaagggtgtcgaaggcctgacc
cgcggcaccggtgtgcacgcggccgcggtcatcctgtccaagacgaagctgaccgagcgc
atcccgctgcacatgcgcgccaaggacggcgtcaagatcaccggatttgactaccccagc
tgcgaaaacatggggctggtcaagatggacttcctgggcctgcgcaacctgggcgtgatc
gaccacgcgctgacgaacatccgtgagaaccgcggcgtcaagctggccaccgtcgacccg
ggcaacggcgacaccagcgtcaccgtgatcccgctggatgacaagaagaccttcgagctt
ctgggccgcggcgacacgttcggcgtgttccagctcgacggcggcggcatgcgcgcgctg
ctgaagctgatggaaccctcccgcttcgaggacatcgcggccgccctcgccctgtaccgg
cccggcccgatggctgccaacgcgcacaccaactacgcgctgcggcaaaacggcaagcag
gacccggacccgatccaccccgagctgaaggaagtcctggacccgatcctgggctccacc
caccacctgctcatcttccaagagcagatcatggccatcgcccggaccttggccggctac
acgctcggtggcgccgacatgctgcgccgcgcgatgggcaagaagaagcccgaggtgctg
gccgccgagtggcagaagttccacgacggcatggccgacaacgactactcggaagagtcc
atcaaggcgatctgggacgtcatgctcccgttctccggctacgcgttcaacaagtcccac
accgcaggctacggactcgtctcctactggacggcctacctcaaggccaactacccggcc
gagtacatggcggccctgctcacctctgtcggtgacgacaaggacaaggccggcatctac
ctcgccgatgcccgcaagctcggcgtcaccgtcctcgcgccggatgtgaacgagtcgctc
gccgagttcgcggccgtcggcgacgacgtccgcttcggactgttgtcagtacgcaacgtg
ggcgacaacgtcatcgaatcgatcatcgcggcccgcaagtccaaggggaagttcacttcg
ttctccgacttcctcgacaaggtcgacctgcccgcgctgaacaagcgggccgtggaatcc
ctcatcagatccggcgccttcgactccctcggacacactcgcaagggactgtccgccgcc
cacgagagcgccatcgatgcagtcgtcccgctcaagaaggcagccgcctacggacaggac
gatctcttcgccggcctcggcgatgcggccagcgacgacagcttcagcctggacgtgccg
gtcagcgacgacgaatggccccgcaagcaactgctgtccatcgaacgcgagatgctcggc
atgtacgtctccgcgcacccgctggacggcaccgagcacatcctgtccaccaatcgcgac
accaccatcgtggacctgttggcctcaggacgtaccgaaggcgtggtccgcctctccggc
ctgatcaccagcgtccagcccaagatgaccaaacaaggcaatgcctgggccatcgtcaac
ctcgccgaccgtgacggaacgatcgaggtactcttcttccccgccacctaccagatggtc
gccgccgccctggtggaggacagcgtcatcaccgtgcaaggccgcgtaaacgaccgcgac
ggcgccatcagcatcttcgggcaggaactgaaggtcctcgatgtgacctccgccgaacgc
gacggcgcagcccccgtccagcttcggctgccctatcaccgcatcaacgagctgtgcatc
aacgaactcaaacgcatcatgggtgcccaccccggccagaatcccgttcaactcgcggtg
cgcggcccgcagaagaccgtcgtctaccagcttccctcgctggtgaacgccgctaccatc
gcctcagacatcaagggatcctttggcccggaggcgtggcaaggggtggcgtga
DBGET
integrated database retrieval system
